(data stored in SCRATCH zone)

SWISSPROT: Q13SD6_PARXL

ID   Q13SD6_PARXL            Unreviewed;       217 AA.
AC   Q13SD6;
DT   22-AUG-2006, integrated into UniProtKB/TrEMBL.
DT   22-AUG-2006, sequence version 1.
DT   07-JUN-2017, entry version 74.
DE   SubName: Full=ABC glycine betaine/L-proline transporter, inner membrane subunit {ECO:0000313|EMBL:ABE33003.1};
GN   ORFNames=Bxe_B2993 {ECO:0000313|EMBL:ABE33003.1};
OS   Paraburkholderia xenovorans (strain LB400).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Burkholderiaceae; Paraburkholderia.
OX   NCBI_TaxID=266265 {ECO:0000313|EMBL:ABE33003.1, ECO:0000313|Proteomes:UP000001817};
RN   [1] {ECO:0000313|EMBL:ABE33003.1, ECO:0000313|Proteomes:UP000001817}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=LB400 {ECO:0000313|EMBL:ABE33003.1,
RC   ECO:0000313|Proteomes:UP000001817};
RX   PubMed=17030797; DOI=10.1073/pnas.0606924103;
RA   Chain P.S.G., Denef V.J., Konstantinidis K.T., Vergez L.M., Agullo L.,
RA   Reyes V.L., Hauser L., Cordova M., Gomez L., Gonzalez M., Land M.,
RA   Lao V., Larimer F., LiPuma J.J., Mahenthiralingam E., Malfatti S.A.,
RA   Marx C.J., Parnell J.J., Ramette A., Richardson P., Seeger M.,
RA   Smith D., Spilker T., Sul W.J., Tsoi T.V., Ulrich L.E., Zhulin I.B.,
RA   Tiedje J.M.;
RT   "Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp
RT   genome shaped for versatility.";
RL   Proc. Natl. Acad. Sci. U.S.A. 103:15280-15287(2006).
CC   -!- SUBCELLULAR LOCATION: Cell membrane
CC       {ECO:0000256|RuleBase:RU363032}; Multi-pass membrane protein
CC       {ECO:0000256|RuleBase:RU363032}.
CC   -!- SIMILARITY: Belongs to the binding-protein-dependent transport
CC       system permease family. {ECO:0000256|RuleBase:RU363032}.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; CP000271; ABE33003.1; -; Genomic_DNA.
DR   RefSeq; WP_011490392.1; NZ_CP008762.1.
DR   ProteinModelPortal; Q13SD6; -.
DR   STRING; 266265.Bxe_B2993; -.
DR   EnsemblBacteria; ABE33003; ABE33003; Bxe_B2993.
DR   GeneID; 4006856; -.
DR   KEGG; bxb:DR64_5323; -.
DR   KEGG; bxe:Bxe_B2993; -.
DR   PATRIC; fig|266265.5.peg.4696; -.
DR   eggNOG; ENOG4105E90; Bacteria.
DR   eggNOG; COG1174; LUCA.
DR   HOGENOM; HOG000012907; -.
DR   KO; K05846; -.
DR   OMA; IFARFGH; -.
DR   OrthoDB; POG091H05HO; -.
DR   Proteomes; UP000001817; Chromosome 2.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0006810; P:transport; IEA:UniProtKB-KW.
DR   CDD; cd06261; TM_PBP2; 1.
DR   InterPro; IPR000515; MetI-like.
DR   Pfam; PF00528; BPD_transp_1; 1.
DR   SUPFAM; SSF161098; SSF161098; 1.
DR   PROSITE; PS50928; ABC_TM1; 1.
PE   3: Inferred from homology;
DR   PRODOM; Q13SD6.
DR   SWISS-2DPAGE; Q13SD6.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001817};
KW   Membrane {ECO:0000256|RuleBase:RU363032,
KW   ECO:0000256|SAAS:SAAS00819239};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001817};
KW   Transmembrane {ECO:0000256|RuleBase:RU363032,
KW   ECO:0000256|SAAS:SAAS00819262};
KW   Transmembrane helix {ECO:0000256|RuleBase:RU363032,
KW   ECO:0000256|SAAS:SAAS00819286};
KW   Transport {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM     20     42       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM     49     73       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM     79    101       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM    150    172       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM    184    205       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   DOMAIN       18    202       ABC transmembrane type-1.
FT                                {ECO:0000259|PROSITE:PS50928}.
SQ   SEQUENCE   217 AA;  22923 MW;  854737151C214D51 CRC64;
     MTVFDYLSAN WPELLQLTAQ HVWLVGIAVG CAIFVGVPLG ILINWHEWLA APLLSIATVV
     LTLPSIALFG LMIPVFSRFG QGIGAVPAIT AVFLYSLLPI MRNTYLALRN VDAGIKEAGI
     GIGMTVWQRL RLVDLPLAVP VILGGVRTAV VMNIGVMTIA AVIGAGGLGT LIIRAIGQSS
     MMKLLVGAVL VSVLAIVADL LLQALQRLLT PKGVQKT
//

If you have problems or comments...

PBIL Back to PBIL home page