(data stored in SCRATCH zone)

SWISSPROT: Q13SE6_PARXL

ID   Q13SE6_PARXL            Unreviewed;       319 AA.
AC   Q13SE6;
DT   22-AUG-2006, integrated into UniProtKB/TrEMBL.
DT   22-AUG-2006, sequence version 1.
DT   07-JUN-2017, entry version 77.
DE   SubName: Full=Transcriptional regulator, AraC family with amidase-like domain {ECO:0000313|EMBL:ABE32993.1};
GN   ORFNames=Bxe_B3004 {ECO:0000313|EMBL:ABE32993.1};
OS   Paraburkholderia xenovorans (strain LB400).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Burkholderiaceae; Paraburkholderia.
OX   NCBI_TaxID=266265 {ECO:0000313|EMBL:ABE32993.1, ECO:0000313|Proteomes:UP000001817};
RN   [1] {ECO:0000313|EMBL:ABE32993.1, ECO:0000313|Proteomes:UP000001817}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=LB400 {ECO:0000313|EMBL:ABE32993.1,
RC   ECO:0000313|Proteomes:UP000001817};
RX   PubMed=17030797; DOI=10.1073/pnas.0606924103;
RA   Chain P.S.G., Denef V.J., Konstantinidis K.T., Vergez L.M., Agullo L.,
RA   Reyes V.L., Hauser L., Cordova M., Gomez L., Gonzalez M., Land M.,
RA   Lao V., Larimer F., LiPuma J.J., Mahenthiralingam E., Malfatti S.A.,
RA   Marx C.J., Parnell J.J., Ramette A., Richardson P., Seeger M.,
RA   Smith D., Spilker T., Sul W.J., Tsoi T.V., Ulrich L.E., Zhulin I.B.,
RA   Tiedje J.M.;
RT   "Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp
RT   genome shaped for versatility.";
RL   Proc. Natl. Acad. Sci. U.S.A. 103:15280-15287(2006).
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DR   EMBL; CP000271; ABE32993.1; -; Genomic_DNA.
DR   RefSeq; WP_011490382.1; NZ_CP008762.1.
DR   ProteinModelPortal; Q13SE6; -.
DR   STRING; 266265.Bxe_B3004; -.
DR   EnsemblBacteria; ABE32993; ABE32993; Bxe_B3004.
DR   GeneID; 4006845; -.
DR   KEGG; bxb:DR64_5333; -.
DR   KEGG; bxe:Bxe_B3004; -.
DR   PATRIC; fig|266265.5.peg.4685; -.
DR   eggNOG; ENOG4105ECQ; Bacteria.
DR   eggNOG; COG4977; LUCA.
DR   HOGENOM; HOG000063189; -.
DR   OMA; TTHWECA; -.
DR   OrthoDB; POG091H039M; -.
DR   Proteomes; UP000001817; Chromosome 2.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0003700; F:transcription factor activity, sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR   Gene3D; 3.40.50.880; -; 1.
DR   InterPro; IPR029062; Class_I_gatase-like.
DR   InterPro; IPR002818; DJ-1/PfpI.
DR   InterPro; IPR009057; Homeobox-like.
DR   InterPro; IPR018060; HTH_AraC.
DR   Pfam; PF01965; DJ-1_PfpI; 1.
DR   Pfam; PF12833; HTH_18; 1.
DR   SMART; SM00342; HTH_ARAC; 1.
DR   SUPFAM; SSF46689; SSF46689; 2.
DR   SUPFAM; SSF52317; SSF52317; 1.
DR   PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE   4: Predicted;
DR   PRODOM; Q13SE6.
DR   SWISS-2DPAGE; Q13SE6.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001817};
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00593,
KW   ECO:0000256|SAAS:SAAS00048696};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001817};
KW   Transcription {ECO:0000256|PROSITE-ProRule:PRU00593};
KW   Transcription regulation {ECO:0000256|PROSITE-ProRule:PRU00593}.
FT   DOMAIN      217    315       HTH araC/xylS-type DNA-binding.
FT                                {ECO:0000259|PROSITE:PS01124}.
FT   DNA_BIND    234    255       H-T-H motif. {ECO:0000256|PROSITE-
FT                                ProRule:PRU00593}.
FT   DNA_BIND    282    305       H-T-H motif. {ECO:0000256|PROSITE-
FT                                ProRule:PRU00593}.
SQ   SEQUENCE   319 AA;  34217 MW;  40CFC07948443C9C CRC64;
     MPTVAIAIFP GVQALDVAGP VDVFSEANRF IAPNNRYEVT LLGAESTPLR ASNGMTLVAD
     ATFSEARHTF DLALIAGGPA LPERAPDARV LDWLANAASQ CGRYGSICTG AFALGHAGLL
     DGHNVTTHWQ HAAQLAAQFP NARVDFDRIY LRDGPLVTSA GVTAGIDLSL ALVAEDHGPQ
     IALAVAKRLV VFAQRQGGQS QFSPYLTAPA DETSPVAKVQ AHVMERIRES FTVKQLADVA
     GMSARNFARV FVQETGVTPH EFVERARVDA ARKLLESSGA ALKAIAYDCG FGTADRMRIV
     FTKRIGATPM QYRERFRSP
//

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