(data stored in SCRATCH zone)

SWISSPROT: Q13XY2_PARXL

ID   Q13XY2_PARXL            Unreviewed;       535 AA.
AC   Q13XY2;
DT   22-AUG-2006, integrated into UniProtKB/TrEMBL.
DT   22-AUG-2006, sequence version 1.
DT   11-DEC-2019, entry version 79.
DE   SubName: Full=Cytochrome bd quinol oxidase subunit 1 apoprotein {ECO:0000313|EMBL:ABE31057.1};
DE            EC=1.10.3.- {ECO:0000313|EMBL:ABE31057.1};
GN   ORFNames=Bxe_A1908 {ECO:0000313|EMBL:ABE31057.1}, Bxe_A4148
GN   {ECO:0000313|EMBL:ABE28852.1};
OS   Paraburkholderia xenovorans (strain LB400).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Burkholderiaceae; Paraburkholderia.
OX   NCBI_TaxID=266265 {ECO:0000313|EMBL:ABE31057.1, ECO:0000313|Proteomes:UP000001817};
RN   [1] {ECO:0000313|EMBL:ABE31057.1, ECO:0000313|Proteomes:UP000001817}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=LB400 {ECO:0000313|EMBL:ABE31057.1,
RC   ECO:0000313|Proteomes:UP000001817};
RX   PubMed=17030797; DOI=10.1073/pnas.0606924103;
RA   Chain P.S., Denef V.J., Konstantinidis K.T., Vergez L.M., Agullo L.,
RA   Reyes V.L., Hauser L., Cordova M., Gomez L., Gonzalez M., Land M., Lao V.,
RA   Larimer F., LiPuma J.J., Mahenthiralingam E., Malfatti S.A., Marx C.J.,
RA   Parnell J.J., Ramette A., Richardson P., Seeger M., Smith D., Spilker T.,
RA   Sul W.J., Tsoi T.V., Ulrich L.E., Zhulin I.B., Tiedje J.M.;
RT   "Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp genome
RT   shaped for versatility.";
RL   Proc. Natl. Acad. Sci. U.S.A. 103:15280-15287(2006).
RN   [2] {ECO:0000313|EMBL:ABE31057.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=LB400 {ECO:0000313|EMBL:ABE31057.1};
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA   Glavina del Rio T., Hammon N., Israni S., Pitluck S., Chain P.,
RA   Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M.,
RA   Kyrpides N., Lykidis A., Richardson P.;
RT   "Complete sequence of Chromosome 1 of Burkholderia xenovorans LB400.";
RL   Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBCELLULAR LOCATION: Cell inner membrane
CC       {ECO:0000256|PIRNR:PIRNR006446}.
CC   -!- SIMILARITY: Belongs to the cytochrome ubiquinol oxidase subunit 1
CC       family. {ECO:0000256|PIRNR:PIRNR006446}.
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DR   EMBL; CP000270; ABE28852.1; -; Genomic_DNA.
DR   EMBL; CP000270; ABE31057.1; -; Genomic_DNA.
DR   RefSeq; WP_011486685.1; NZ_CP008760.1.
DR   STRING; 266265.Bxe_A4148; -.
DR   EnsemblBacteria; ABE28852; ABE28852; Bxe_A4148.
DR   EnsemblBacteria; ABE31057; ABE31057; Bxe_A1908.
DR   GeneID; 4004853; -.
DR   KEGG; bxb:DR64_1825; -.
DR   KEGG; bxb:DR64_4070; -.
DR   KEGG; bxe:Bxe_A1908; -.
DR   KEGG; bxe:Bxe_A4148; -.
DR   PATRIC; fig|266265.5.peg.2637; -.
DR   eggNOG; ENOG4105C4M; Bacteria.
DR   eggNOG; COG1271; LUCA.
DR   HOGENOM; HOG000084938; -.
DR   KO; K00425; -.
DR   OMA; RDMTKFW; -.
DR   OrthoDB; 271551at2; -.
DR   BioCyc; BXEN266265:BXE_RS01565-MONOMER; -.
DR   BioCyc; BXEN266265:BXE_RS12475-MONOMER; -.
DR   Proteomes; UP000001817; Chromosome 1.
DR   GO; GO:0070069; C:cytochrome complex; IEA:UniProtKB-UniRule.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0009055; F:electron transfer activity; IEA:UniProtKB-UniRule.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0019646; P:aerobic electron transport chain; IEA:InterPro.
DR   InterPro; IPR002585; Cyt-d_ubiquinol_oxidase_su_1.
DR   PANTHER; PTHR30365; PTHR30365; 1.
DR   Pfam; PF01654; Cyt_bd_oxida_I; 1.
DR   PIRSF; PIRSF006446; Cyt_quinol_oxidase_1; 2.
PE   3: Inferred from homology;
DR   PRODOM; Q13XY2.
DR   SWISS-2DPAGE; Q13XY2.
KW   Cell membrane {ECO:0000256|PIRNR:PIRNR006446};
KW   Electron transport {ECO:0000256|PIRNR:PIRNR006446};
KW   Heme {ECO:0000256|PIRNR:PIRNR006446}; Iron {ECO:0000256|PIRNR:PIRNR006446};
KW   Membrane {ECO:0000256|PIRNR:PIRNR006446};
KW   Metal-binding {ECO:0000256|PIRNR:PIRNR006446};
KW   Oxidoreductase {ECO:0000313|EMBL:ABE31057.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001817};
KW   Transmembrane {ECO:0000256|PIRNR:PIRNR006446};
KW   Transmembrane helix {ECO:0000256|PIRNR:PIRNR006446};
KW   Transport {ECO:0000256|PIRNR:PIRNR006446}.
FT   TRANSMEM        20..44
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|PIRNR:PIRNR006446"
FT   TRANSMEM        56..75
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|PIRNR:PIRNR006446"
FT   TRANSMEM        95..118
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|PIRNR:PIRNR006446"
FT   TRANSMEM        130..153
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|PIRNR:PIRNR006446"
FT   TRANSMEM        186..210
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|PIRNR:PIRNR006446"
FT   TRANSMEM        217..239
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|PIRNR:PIRNR006446"
FT   TRANSMEM        390..414
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|PIRNR:PIRNR006446"
FT   TRANSMEM        426..448
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|PIRNR:PIRNR006446"
FT   TRANSMEM        475..498
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|PIRNR:PIRNR006446"
FT   REGION          512..535
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   535 AA;  59737 MW;  8A67AF87D3DCBFF5 CRC64;
     MPVSEVVELS RLQFAITALY HFLFVPLTLG LSWLLVIMES VYVMTGKQIY KDMTQFWGKL
     FGINFAMGVT TGLTLEFQFG TNWSYYSHYV GDIFGVPLAV EGLMAFFLES TFVGLFFFGW
     KRLSRVQHVI VTFLVALGSN LSALWILVAN GWMNNPVGAT FNYQTMRMEL DSIFSVLFNP
     VAQVKFVHTV SAGYVTASMF VLGVSSWYLL KRRDTEFALR SFAIAAGFGL ASTLCVIVLG
     DESGYRTGEV QQVKLAAIES EWETAPAPAP FTIIGIPNQK EERTDYAIRV PYALGLIATR
     SLDEPVVGLK DLMVRNEARI RNGMLAYAAL QKLKQGDVTD EAKAAFDAHK QDLGYGLMLK
     QFTANVTDAT PDQITQAAKK TIPPVAPVFF SFRLMVGLGI LFLATFVLAF WFCAQRSLLL
     EKRRWFLRWA LWAIPLPWLA AEFGWIVAEV GRQPWTIAGI LPTNLSASSL TAGDLYLSIG
     GFVVFYTVLF IIEIMLMFKY ARLGPSSLHT GRYHHEQPSP DQPLDNRPLP TSTVA
//

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