(data stored in SCRATCH zone)

SWISSPROT: Q3IDR5_PSEHT

ID   Q3IDR5_PSEHT            Unreviewed;       229 AA.
AC   Q3IDR5;
DT   08-NOV-2005, integrated into UniProtKB/TrEMBL.
DT   08-NOV-2005, sequence version 1.
DT   07-JUN-2017, entry version 91.
DE   RecName: Full=Pseudouridine synthase {ECO:0000256|RuleBase:RU003887};
DE            EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};
GN   OrderedLocusNames=PSHAa0085 {ECO:0000313|EMBL:CAI85194.1};
OS   Pseudoalteromonas haloplanktis (strain TAC 125).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
OC   Pseudoalteromonadaceae; Pseudoalteromonas.
OX   NCBI_TaxID=326442 {ECO:0000313|EMBL:CAI85194.1, ECO:0000313|Proteomes:UP000006843};
RN   [1] {ECO:0000313|EMBL:CAI85194.1, ECO:0000313|Proteomes:UP000006843}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=TAC 125 {ECO:0000313|Proteomes:UP000006843};
RX   PubMed=16169927; DOI=10.1101/gr.4126905;
RA   Medigue C., Krin E., Pascal G., Barbe V., Bernsel A., Bertin P.,
RA   Cheung F., Cruveiller S., Damico S., Duilio A., Fang G., Feller G.,
RA   Mangenot S., Marino G., Nilsson J., Parilli E., Rocha E., Rouy Z.,
RA   Sekowska A., Tutino M.L., Vallenet D., von Heijne G., Danchin A.;
RT   "Coping with cold: the genome of the versatile marine Antarctica
RT   bacterium Pseudoalteromonas haloplanktis TAC125.";
RL   Genome Res. 15:1325-1335(2005).
CC   -!- SIMILARITY: Belongs to the pseudouridine synthase RsuA family.
CC       {ECO:0000256|RuleBase:RU003887, ECO:0000256|SAAS:SAAS00806985}.
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DR   EMBL; CR954246; CAI85194.1; -; Genomic_DNA.
DR   RefSeq; WP_011326812.1; NC_007481.1.
DR   ProteinModelPortal; Q3IDR5; -.
DR   STRING; 326442.PSHAa0085; -.
DR   EnsemblBacteria; CAI85194; CAI85194; PSHAa0085.
DR   KEGG; pha:PSHAa0085; -.
DR   PATRIC; fig|326442.8.peg.84; -.
DR   eggNOG; ENOG4105FE9; Bacteria.
DR   eggNOG; COG1187; LUCA.
DR   HOGENOM; HOG000044954; -.
DR   KO; K06183; -.
DR   OMA; LMHPDFG; -.
DR   OrthoDB; POG091H02IO; -.
DR   BioCyc; PHAL326442:GJIU-87-MONOMER; -.
DR   Proteomes; UP000006843; Chromosome I.
DR   GO; GO:0016829; F:lyase activity; IEA:UniProtKB-KW.
DR   GO; GO:0009982; F:pseudouridine synthase activity; IEA:InterPro.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0001522; P:pseudouridine synthesis; IEA:InterPro.
DR   Gene3D; 3.10.290.10; -; 1.
DR   InterPro; IPR020103; PsdUridine_synth_cat_dom.
DR   InterPro; IPR000748; PsdUridine_synth_RsuA/RluB/E/F.
DR   InterPro; IPR018496; PsdUridine_synth_RsuA/RluB_CS.
DR   InterPro; IPR006145; PsdUridine_synth_RsuA/RluD.
DR   InterPro; IPR002942; S4_RNA-bd.
DR   PANTHER; PTHR21600; PTHR21600; 1.
DR   Pfam; PF00849; PseudoU_synth_2; 1.
DR   Pfam; PF01479; S4; 1.
DR   SMART; SM00363; S4; 1.
DR   SUPFAM; SSF55120; SSF55120; 1.
DR   TIGRFAMs; TIGR00093; TIGR00093; 1.
DR   PROSITE; PS01149; PSI_RSU; 1.
DR   PROSITE; PS50889; S4; 1.
PE   3: Inferred from homology;
DR   PRODOM; Q3IDR5.
DR   SWISS-2DPAGE; Q3IDR5.
KW   Complete proteome {ECO:0000313|Proteomes:UP000006843};
KW   Isomerase {ECO:0000256|RuleBase:RU003887,
KW   ECO:0000256|SAAS:SAAS00806980}; Lyase {ECO:0000313|EMBL:CAI85194.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006843};
KW   RNA-binding {ECO:0000256|SAAS:SAAS00082949}.
FT   DOMAIN        5     70       S4 RNA-binding. {ECO:0000259|PROSITE:
FT                                PS50889}.
SQ   SEQUENCE   229 AA;  25834 MW;  9F15FABCC95CEB3C CRC64;
     MSTKIRLAKY IAHAGVCSRK QASRLIDEGA VIVNNRPANH IDHVDEQDQI TVNGQIIKGT
     AELIYFAYHK PVGIDCKLDQ NDPASLYHHL PTITRVYPIG RLDKDSRGLL ILTNDGELCN
     QLIHPDFHQP KRYLVSVNKS IDAEFCTKMA AGVPVDKQIT LPCSVEKIAD KQFSIILKQG
     LNRQIRKMAH YCGYKVIDLY REQISELTLQ TLNLAQGQYI AINKSDIIK
//

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