(data stored in SCRATCH zone)

SWISSPROT: Q3IIC9_PSEHT

ID   Q3IIC9_PSEHT            Unreviewed;       408 AA.
AC   Q3IIC9;
DT   08-NOV-2005, integrated into UniProtKB/TrEMBL.
DT   08-NOV-2005, sequence version 1.
DT   08-MAY-2019, entry version 81.
DE   SubName: Full=Type IV pilus biogenesis protein PilC {ECO:0000313|EMBL:CAI85479.1};
GN   Name=pilC {ECO:0000313|EMBL:CAI85479.1};
GN   OrderedLocusNames=PSHAa0381 {ECO:0000313|EMBL:CAI85479.1};
OS   Pseudoalteromonas haloplanktis (strain TAC 125).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
OC   Pseudoalteromonadaceae; Pseudoalteromonas.
OX   NCBI_TaxID=326442 {ECO:0000313|EMBL:CAI85479.1, ECO:0000313|Proteomes:UP000006843};
RN   [1] {ECO:0000313|EMBL:CAI85479.1, ECO:0000313|Proteomes:UP000006843}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=TAC 125 {ECO:0000313|Proteomes:UP000006843};
RX   PubMed=16169927; DOI=10.1101/gr.4126905;
RA   Medigue C., Krin E., Pascal G., Barbe V., Bernsel A., Bertin P.,
RA   Cheung F., Cruveiller S., Damico S., Duilio A., Fang G., Feller G.,
RA   Mangenot S., Marino G., Nilsson J., Parilli E., Rocha E., Rouy Z.,
RA   Sekowska A., Tutino M.L., Vallenet D., von Heijne G., Danchin A.;
RT   "Coping with cold: the genome of the versatile marine Antarctica
RT   bacterium Pseudoalteromonas haloplanktis TAC125.";
RL   Genome Res. 15:1325-1335(2005).
CC   -!- SUBCELLULAR LOCATION: Cell inner membrane
CC       {ECO:0000256|RuleBase:RU003923}; Multi-pass membrane protein
CC       {ECO:0000256|RuleBase:RU003923}.
CC   -!- SIMILARITY: Belongs to the GSP F family.
CC       {ECO:0000256|RuleBase:RU003923}.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; CR954246; CAI85479.1; -; Genomic_DNA.
DR   RefSeq; WP_011327092.1; NC_007481.1.
DR   STRING; 326442.PSHAa0381; -.
DR   EnsemblBacteria; CAI85479; CAI85479; PSHAa0381.
DR   KEGG; pha:PSHAa0381; -.
DR   PATRIC; fig|326442.8.peg.365; -.
DR   eggNOG; ENOG4105D7Q; Bacteria.
DR   eggNOG; COG1459; LUCA.
DR   HOGENOM; HOG000253740; -.
DR   KO; K02653; -.
DR   OMA; TRQMATM; -.
DR   OrthoDB; 1268170at2; -.
DR   BioCyc; PHAL326442:PSHA_RS01890-MONOMER; -.
DR   Proteomes; UP000006843; Chromosome I.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0009306; P:protein secretion; IEA:InterPro.
DR   Gene3D; 1.20.81.30; -; 2.
DR   InterPro; IPR003004; GspF/PilC.
DR   InterPro; IPR018076; T2SS_F.
DR   InterPro; IPR042094; T2SS_F_sf.
DR   InterPro; IPR001992; Type_2_secretion_system_CS.
DR   PANTHER; PTHR30012; PTHR30012; 1.
DR   Pfam; PF00482; T2SSF; 2.
DR   PRINTS; PR00812; BCTERIALGSPF.
DR   PROSITE; PS00874; T2SP_F; 1.
PE   3: Inferred from homology;
DR   PRODOM; Q3IIC9.
DR   SWISS-2DPAGE; Q3IIC9.
KW   Complete proteome {ECO:0000313|Proteomes:UP000006843};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006843};
KW   Transmembrane {ECO:0000256|RuleBase:RU003923,
KW   ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius};
KW   Transport {ECO:0000256|RuleBase:RU003923}.
FT   TRANSMEM    173    196       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    226    242       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    381    402       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN       75    197       T2SSF. {ECO:0000259|Pfam:PF00482}.
FT   DOMAIN      279    400       T2SSF. {ECO:0000259|Pfam:PF00482}.
SQ   SEQUENCE   408 AA;  44518 MW;  BE6079EA54A50946 CRC64;
     MAKQQEKKGQ DTFEWVGVST RGKRLEGELT GSSVALVKAQ LRKQGITPSK VKRKAKPLFG
     ARLQKITPKD IAIVTRQIAT MLMAGVPLIQ SIEMIGTGAT NKSLGKLMET IADEVKAGQP
     LSQALRRHPR YFDDLYCDLV ASGEQSGALD KIFDRVAIYK EKSEALKSKI KKAMFYPIAV
     LVIALIVTSI LLIFVVPQFQ DIFAGFGAEL PAFTLFVISI SEFMQAYWWI ILIIMFAFGW
     AFKEAHLKSL KLRDATDRAI LKLPVIGMIL NKAAVARYAR TLSTTFAAGV PLVDALDSAA
     GASGNAVYRY AILEIKAEVS SGNQMNWAMR NSKIFPDMVI QMVAIGEESG SLDGMLGKVA
     TIYEQEVDDA VDGLSSLLEP MIMAVLGVLV GGLIIAMYLP IFQLGSVI
//

If you have problems or comments...

PBIL Back to PBIL home page