(data stored in SCRATCH zone)

SWISSPROT: Q3IIG5_PSEHT

ID   Q3IIG5_PSEHT            Unreviewed;       181 AA.
AC   Q3IIG5;
DT   08-NOV-2005, integrated into UniProtKB/TrEMBL.
DT   08-NOV-2005, sequence version 1.
DT   07-JUN-2017, entry version 62.
DE   SubName: Full=Putative orphan protein putative transposase (Partial) {ECO:0000313|EMBL:CAI85503.1};
DE            EC=2.7.7.49 {ECO:0000313|EMBL:CAI85503.1};
GN   OrderedLocusNames=PSHAa0405 {ECO:0000313|EMBL:CAI85503.1};
OS   Pseudoalteromonas haloplanktis (strain TAC 125).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
OC   Pseudoalteromonadaceae; Pseudoalteromonas.
OX   NCBI_TaxID=326442 {ECO:0000313|EMBL:CAI85503.1, ECO:0000313|Proteomes:UP000006843};
RN   [1] {ECO:0000313|EMBL:CAI85503.1, ECO:0000313|Proteomes:UP000006843}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=TAC 125 {ECO:0000313|Proteomes:UP000006843};
RX   PubMed=16169927; DOI=10.1101/gr.4126905;
RA   Medigue C., Krin E., Pascal G., Barbe V., Bernsel A., Bertin P.,
RA   Cheung F., Cruveiller S., Damico S., Duilio A., Fang G., Feller G.,
RA   Mangenot S., Marino G., Nilsson J., Parilli E., Rocha E., Rouy Z.,
RA   Sekowska A., Tutino M.L., Vallenet D., von Heijne G., Danchin A.;
RT   "Coping with cold: the genome of the versatile marine Antarctica
RT   bacterium Pseudoalteromonas haloplanktis TAC125.";
RL   Genome Res. 15:1325-1335(2005).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; CR954246; CAI85503.1; -; Genomic_DNA.
DR   ProteinModelPortal; Q3IIG5; -.
DR   STRING; 326442.PSHAa0405; -.
DR   EnsemblBacteria; CAI85503; CAI85503; PSHAa0405.
DR   KEGG; pha:PSHAa0405; -.
DR   eggNOG; ENOG4105CMM; Bacteria.
DR   eggNOG; COG2801; LUCA.
DR   HOGENOM; HOG000118481; -.
DR   KO; K07497; -.
DR   OMA; DELLNSW; -.
DR   OrthoDB; POG091H02QF; -.
DR   BioCyc; PHAL326442:GJIU-411-MONOMER; -.
DR   Proteomes; UP000006843; Chromosome I.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-EC.
DR   GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR   Gene3D; 3.30.420.10; -; 1.
DR   InterPro; IPR001584; Integrase_cat-core.
DR   InterPro; IPR012337; RNaseH-like_dom.
DR   Pfam; PF00665; rve; 1.
DR   SUPFAM; SSF53098; SSF53098; 1.
DR   PROSITE; PS50994; INTEGRASE; 1.
PE   4: Predicted;
DR   PRODOM; Q3IIG5.
DR   SWISS-2DPAGE; Q3IIG5.
KW   Complete proteome {ECO:0000313|Proteomes:UP000006843};
KW   Nucleotidyltransferase {ECO:0000313|EMBL:CAI85503.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006843};
KW   Transferase {ECO:0000313|EMBL:CAI85503.1}.
FT   DOMAIN       16    180       Integrase catalytic.
FT                                {ECO:0000259|PROSITE:PS50994}.
SQ   SEQUENCE   181 AA;  21361 MW;  5778390D1FD37674 CRC64;
     MRIKPRKRLN RDKPEPLAVP ETINECWSMD FMHDQLADGR ACRLFNVIDD FNREGLTIDA
     DLSLPAERVI RSLNQIIEWR GKPKAIRCDN GPEYISKQLA QWALNNDIEL RFIQPGNPQQ
     NAYIERFNRT VRYDWLSHYI YSDISELQDR ATDWLWTYNN ERPNMGLGGI TPIQKLEKLN
     N
//

If you have problems or comments...

PBIL Back to PBIL home page