(data stored in SCRATCH zone)

SWISSPROT: Q3KJX8_PSEPF

ID   Q3KJX8_PSEPF            Unreviewed;       203 AA.
AC   Q3KJX8;
DT   08-NOV-2005, integrated into UniProtKB/TrEMBL.
DT   08-NOV-2005, sequence version 1.
DT   08-MAY-2019, entry version 104.
DE   SubName: Full=RNA polymerase, sigma subunit, ECF family {ECO:0000313|EMBL:ABA71928.1};
GN   OrderedLocusNames=Pfl01_0184 {ECO:0000313|EMBL:ABA71928.1};
OS   Pseudomonas fluorescens (strain Pf0-1).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC   Pseudomonadaceae; Pseudomonas.
OX   NCBI_TaxID=205922 {ECO:0000313|EMBL:ABA71928.1, ECO:0000313|Proteomes:UP000002704};
RN   [1] {ECO:0000313|EMBL:ABA71928.1, ECO:0000313|Proteomes:UP000002704}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Pf0-1 {ECO:0000313|EMBL:ABA71928.1,
RC   ECO:0000313|Proteomes:UP000002704};
RX   PubMed=19432983; DOI=10.1186/gb-2009-10-5-r51;
RA   Silby M.W., Cerdeno-Tarraga A.M., Vernikos G.S., Giddens S.R.,
RA   Jackson R.W., Preston G.M., Zhang X.X., Moon C.D., Gehrig S.M.,
RA   Godfrey S.A., Knight C.G., Malone J.G., Robinson Z., Spiers A.J.,
RA   Harris S., Challis G.L., Yaxley A.M., Harris D., Seeger K., Murphy L.,
RA   Rutter S., Squares R., Quail M.A., Saunders E., Mavromatis K.,
RA   Brettin T.S., Bentley S.D., Hothersall J., Stephens E., Thomas C.M.,
RA   Parkhill J., Levy S.B., Rainey P.B., Thomson N.R.;
RT   "Genomic and genetic analyses of diversity and plant interactions of
RT   Pseudomonas fluorescens.";
RL   Genome Biol. 10:R51.1-R51.16(2009).
CC   -!- SIMILARITY: Belongs to the sigma-70 factor family. ECF subfamily.
CC       {ECO:0000256|SAAS:SAAS01160068}.
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DR   EMBL; CP000094; ABA71928.1; -; Genomic_DNA.
DR   RefSeq; WP_011331895.1; NC_007492.2.
DR   STRING; 205922.Pfl01_0184; -.
DR   EnsemblBacteria; ABA71928; ABA71928; Pfl01_0184.
DR   KEGG; pfo:Pfl01_0184; -.
DR   eggNOG; ENOG4105NK8; Bacteria.
DR   eggNOG; ENOG410XT41; LUCA.
DR   HOGENOM; HOG000094755; -.
DR   KO; K03088; -.
DR   OMA; VKSRMRY; -.
DR   BioCyc; PFLU205922:G1G4S-186-MONOMER; -.
DR   Proteomes; UP000002704; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR   GO; GO:0006352; P:DNA-templated transcription, initiation; IEA:InterPro.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR039425; RNA_pol_sigma-70.
DR   InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR   InterPro; IPR007627; RNA_pol_sigma70_r2.
DR   InterPro; IPR013249; RNA_pol_sigma70_r4_t2.
DR   InterPro; IPR013325; RNA_pol_sigma_r2.
DR   InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   PANTHER; PTHR43133; PTHR43133; 1.
DR   Pfam; PF04542; Sigma70_r2; 1.
DR   Pfam; PF08281; Sigma70_r4_2; 1.
DR   SUPFAM; SSF88659; SSF88659; 1.
DR   SUPFAM; SSF88946; SSF88946; 1.
DR   TIGRFAMs; TIGR02937; sigma70-ECF; 1.
PE   3: Inferred from homology;
DR   PRODOM; Q3KJX8.
DR   SWISS-2DPAGE; Q3KJX8.
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000002704};
KW   DNA-binding {ECO:0000256|SAAS:SAAS00611263};
KW   Sigma factor {ECO:0000256|SAAS:SAAS00611278};
KW   Transcription {ECO:0000256|SAAS:SAAS00611290};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS00611294}.
FT   DOMAIN       41    107       Sigma70_r2. {ECO:0000259|Pfam:PF04542}.
FT   DOMAIN      141    189       Sigma70_r4_2. {ECO:0000259|Pfam:PF08281}.
FT   COILED      179    199       {ECO:0000256|SAM:Coils}.
SQ   SEQUENCE   203 AA;  23415 MW;  FE3B4A202BFE2D44 CRC64;
     MSRLKGFITQ LFAFADSLEA SSDESLLARY REGDGKAFEI LYARHRQSLY RFLLGLSGKP
     ELADEVFQET WLSLIRSSSQ PQGRATFRTW LFQIARNRLI DHWRKHGARQ PLHDSYDEQF
     HAVSDDASDP EQLLNLSRDS ERLESALQSL PADQREVFLL RAHGDLDLAQ IASLTETPLE
     TVKSRLRYAQ QKLRRLLAEE VLT
//

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