(data stored in SCRATCH zone)

SWISSPROT: Q3Z5M1_SHISS

ID   Q3Z5M1_SHISS            Unreviewed;       279 AA.
AC   Q3Z5M1;
DT   27-SEP-2005, integrated into UniProtKB/TrEMBL.
DT   27-SEP-2005, sequence version 1.
DT   08-MAY-2019, entry version 76.
DE   SubName: Full=IS2 ORF2 {ECO:0000313|EMBL:AAZ86941.1};
GN   OrderedLocusNames=SSON_0144 {ECO:0000313|EMBL:AAZ86938.1}, SSON_0147
GN   {ECO:0000313|EMBL:AAZ86941.1}, SSON_0237
GN   {ECO:0000313|EMBL:AAZ87021.1}, SSON_0324
GN   {ECO:0000313|EMBL:AAZ87102.1}, SSON_0341
GN   {ECO:0000313|EMBL:AAZ87117.1}, SSON_0508
GN   {ECO:0000313|EMBL:AAZ87280.1}, SSON_0732
GN   {ECO:0000313|EMBL:AAZ87481.1}, SSON_1015
GN   {ECO:0000313|EMBL:AAZ87746.1}, SSON_1071
GN   {ECO:0000313|EMBL:AAZ87797.1}, SSON_1266
GN   {ECO:0000313|EMBL:AAZ87979.1}, SSON_1655
GN   {ECO:0000313|EMBL:AAZ88349.1}, SSON_1741
GN   {ECO:0000313|EMBL:AAZ88428.1}, SSON_1916
GN   {ECO:0000313|EMBL:AAZ88584.1}, SSON_2025
GN   {ECO:0000313|EMBL:AAZ88689.1}, SSON_2028
GN   {ECO:0000313|EMBL:AAZ88692.1}, SSON_2291
GN   {ECO:0000313|EMBL:AAZ88937.1}, SSON_2433
GN   {ECO:0000313|EMBL:AAZ89074.1}, SSON_2660
GN   {ECO:0000313|EMBL:AAZ89283.1}, SSON_2775
GN   {ECO:0000313|EMBL:AAZ89392.1}, SSON_3182
GN   {ECO:0000313|EMBL:AAZ89765.1}, SSON_3290
GN   {ECO:0000313|EMBL:AAZ89865.1}, SSON_3823
GN   {ECO:0000313|EMBL:AAZ90365.1}, SSON_3947
GN   {ECO:0000313|EMBL:AAZ90474.1}, SSON_4296
GN   {ECO:0000313|EMBL:AAZ90789.1}, SSON_4311
GN   {ECO:0000313|EMBL:AAZ90803.1}, SSON_P079
GN   {ECO:0000313|EMBL:AAZ91099.1}, SSON_P153
GN   {ECO:0000313|EMBL:AAZ91173.1};
OS   Shigella sonnei (strain Ss046).
OG   Plasmid pSS_046 {ECO:0000313|EMBL:AAZ91099.1,
OG   ECO:0000313|Proteomes:UP000002529}.
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC   Enterobacteriaceae; Shigella.
OX   NCBI_TaxID=300269 {ECO:0000313|EMBL:AAZ86941.1, ECO:0000313|Proteomes:UP000002529};
RN   [1] {ECO:0000313|EMBL:AAZ86941.1, ECO:0000313|Proteomes:UP000002529}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Ss046 {ECO:0000313|EMBL:AAZ86941.1,
RC   ECO:0000313|Proteomes:UP000002529};
RC   PLASMID=Plasmid pSS_046 {ECO:0000313|Proteomes:UP000002529}, and
RC   pSS_046 {ECO:0000313|EMBL:AAZ91099.1};
RX   PubMed=16275786; DOI=10.1093/nar/gki954;
RA   Yang F., Yang J., Zhang X., Chen L., Jiang Y., Yan Y., Tang X.,
RA   Wang J., Xiong Z., Dong J., Xue Y., Zhu Y., Xu X., Sun L., Chen S.,
RA   Nie H., Peng J., Xu J., Wang Y., Yuan Z., Wen Y., Yao Z., Shen Y.,
RA   Qiang B., Hou Y., Yu J., Jin Q.;
RT   "Genome dynamics and diversity of Shigella species, the etiologic
RT   agents of bacillary dysentery.";
RL   Nucleic Acids Res. 33:6445-6458(2005).
RN   [2] {ECO:0000313|EMBL:AAZ91099.1, ECO:0000313|Proteomes:UP000002529}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Ss046 {ECO:0000313|EMBL:AAZ91099.1,
RC   ECO:0000313|Proteomes:UP000002529};
RC   PLASMID=Plasmid pSS_046 {ECO:0000313|Proteomes:UP000002529}, and
RC   pSS_046 {ECO:0000313|EMBL:AAZ91099.1};
RX   PubMed=16122562; DOI=10.1016/j.plasmid.2005.03.002;
RA   Jiang Y., Yang F., Zhang X., Yang J., Chen L., Yan Y., Nie H.,
RA   Xiong Z., Wang J., Dong J., Xue Y., Xu X., Zhu Y., Chen S., Jin Q.;
RT   "The complete sequence and analysis of the large virulence plasmid pSS
RT   of Shigella sonnei.";
RL   Plasmid 54:149-159(2005).
RN   [3] {ECO:0000313|EMBL:AAZ91099.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=Ss046 {ECO:0000313|EMBL:AAZ91099.1};
RC   PLASMID=pSS_046 {ECO:0000313|EMBL:AAZ91099.1};
RA   Yang J., Chen L., Jin Q.;
RL   Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP000038; AAZ86938.1; -; Genomic_DNA.
DR   EMBL; CP000038; AAZ86941.1; -; Genomic_DNA.
DR   EMBL; CP000038; AAZ87021.1; -; Genomic_DNA.
DR   EMBL; CP000038; AAZ87102.1; -; Genomic_DNA.
DR   EMBL; CP000038; AAZ87117.1; -; Genomic_DNA.
DR   EMBL; CP000038; AAZ87280.1; -; Genomic_DNA.
DR   EMBL; CP000038; AAZ87481.1; -; Genomic_DNA.
DR   EMBL; CP000038; AAZ87746.1; -; Genomic_DNA.
DR   EMBL; CP000038; AAZ87797.1; -; Genomic_DNA.
DR   EMBL; CP000038; AAZ87979.1; -; Genomic_DNA.
DR   EMBL; CP000038; AAZ88349.1; -; Genomic_DNA.
DR   EMBL; CP000038; AAZ88428.1; -; Genomic_DNA.
DR   EMBL; CP000038; AAZ88584.1; -; Genomic_DNA.
DR   EMBL; CP000038; AAZ88689.1; -; Genomic_DNA.
DR   EMBL; CP000038; AAZ88692.1; -; Genomic_DNA.
DR   EMBL; CP000038; AAZ88937.1; -; Genomic_DNA.
DR   EMBL; CP000038; AAZ89074.1; -; Genomic_DNA.
DR   EMBL; CP000038; AAZ89283.1; -; Genomic_DNA.
DR   EMBL; CP000038; AAZ89392.1; -; Genomic_DNA.
DR   EMBL; CP000038; AAZ89765.1; -; Genomic_DNA.
DR   EMBL; CP000038; AAZ89865.1; -; Genomic_DNA.
DR   EMBL; CP000038; AAZ90365.1; -; Genomic_DNA.
DR   EMBL; CP000038; AAZ90474.1; -; Genomic_DNA.
DR   EMBL; CP000038; AAZ90789.1; -; Genomic_DNA.
DR   EMBL; CP000038; AAZ90803.1; -; Genomic_DNA.
DR   EMBL; CP000039; AAZ91099.1; -; Genomic_DNA.
DR   EMBL; CP000039; AAZ91173.1; -; Genomic_DNA.
DR   EnsemblBacteria; AAZ86938; AAZ86938; SSON_0144.
DR   EnsemblBacteria; AAZ86941; AAZ86941; SSON_0147.
DR   EnsemblBacteria; AAZ87021; AAZ87021; SSON_0237.
DR   EnsemblBacteria; AAZ87102; AAZ87102; SSON_0324.
DR   EnsemblBacteria; AAZ87117; AAZ87117; SSON_0341.
DR   EnsemblBacteria; AAZ87280; AAZ87280; SSON_0508.
DR   EnsemblBacteria; AAZ87481; AAZ87481; SSON_0732.
DR   EnsemblBacteria; AAZ87746; AAZ87746; SSON_1015.
DR   EnsemblBacteria; AAZ87797; AAZ87797; SSON_1071.
DR   EnsemblBacteria; AAZ87979; AAZ87979; SSON_1266.
DR   EnsemblBacteria; AAZ88349; AAZ88349; SSON_1655.
DR   EnsemblBacteria; AAZ88428; AAZ88428; SSON_1741.
DR   EnsemblBacteria; AAZ88584; AAZ88584; SSON_1916.
DR   EnsemblBacteria; AAZ88689; AAZ88689; SSON_2025.
DR   EnsemblBacteria; AAZ88692; AAZ88692; SSON_2028.
DR   EnsemblBacteria; AAZ88937; AAZ88937; SSON_2291.
DR   EnsemblBacteria; AAZ89074; AAZ89074; SSON_2433.
DR   EnsemblBacteria; AAZ89283; AAZ89283; SSON_2660.
DR   EnsemblBacteria; AAZ89392; AAZ89392; SSON_2775.
DR   EnsemblBacteria; AAZ89765; AAZ89765; SSON_3182.
DR   EnsemblBacteria; AAZ89865; AAZ89865; SSON_3290.
DR   EnsemblBacteria; AAZ90365; AAZ90365; SSON_3823.
DR   EnsemblBacteria; AAZ90474; AAZ90474; SSON_3947.
DR   EnsemblBacteria; AAZ90789; AAZ90789; SSON_4296.
DR   EnsemblBacteria; AAZ90803; AAZ90803; SSON_4311.
DR   EnsemblBacteria; AAZ91099; AAZ91099; SSON_P079.
DR   EnsemblBacteria; AAZ91173; AAZ91173; SSON_P153.
DR   KEGG; ssn:SSON_0144; -.
DR   KEGG; ssn:SSON_0147; -.
DR   KEGG; ssn:SSON_0237; -.
DR   KEGG; ssn:SSON_0324; -.
DR   KEGG; ssn:SSON_0341; -.
DR   KEGG; ssn:SSON_0508; -.
DR   KEGG; ssn:SSON_0732; -.
DR   KEGG; ssn:SSON_1015; -.
DR   KEGG; ssn:SSON_1071; -.
DR   KEGG; ssn:SSON_1266; -.
DR   KEGG; ssn:SSON_1655; -.
DR   KEGG; ssn:SSON_1741; -.
DR   KEGG; ssn:SSON_1916; -.
DR   KEGG; ssn:SSON_2025; -.
DR   KEGG; ssn:SSON_2028; -.
DR   KEGG; ssn:SSON_2291; -.
DR   KEGG; ssn:SSON_2433; -.
DR   KEGG; ssn:SSON_2660; -.
DR   KEGG; ssn:SSON_2775; -.
DR   KEGG; ssn:SSON_3182; -.
DR   KEGG; ssn:SSON_3290; -.
DR   KEGG; ssn:SSON_3823; -.
DR   KEGG; ssn:SSON_3947; -.
DR   KEGG; ssn:SSON_4296; -.
DR   KEGG; ssn:SSON_4311; -.
DR   KEGG; ssn:SSON_P079; -.
DR   KEGG; ssn:SSON_P153; -.
DR   HOGENOM; HOG000118817; -.
DR   KO; K07497; -.
DR   OMA; HDREAIS; -.
DR   Proteomes; UP000002529; Chromosome.
DR   Proteomes; UP000002529; Plasmid pSS_046.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR   Gene3D; 3.30.420.10; -; 1.
DR   InterPro; IPR025948; HTH-like_dom.
DR   InterPro; IPR001584; Integrase_cat-core.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR036397; RNaseH_sf.
DR   Pfam; PF13276; HTH_21; 1.
DR   Pfam; PF00665; rve; 1.
DR   SUPFAM; SSF53098; SSF53098; 1.
DR   PROSITE; PS50994; INTEGRASE; 1.
PE   4: Predicted;
DR   PRODOM; Q3Z5M1.
DR   SWISS-2DPAGE; Q3Z5M1.
KW   Complete proteome {ECO:0000313|Proteomes:UP000002529};
KW   Plasmid {ECO:0000313|EMBL:AAZ91099.1}.
FT   DOMAIN       84    267       Integrase catalytic.
FT                                {ECO:0000259|PROSITE:PS50994}.
SQ   SEQUENCE   279 AA;  32030 MW;  D1FA46CF84C2DB02 CRC64;
     MSRAQLHVIL RRTDDWMDGR RSRHTDDTDV LLRIHHVIGE LPTYGYRRVW ALLRRQAELD
     GMPAINAKRV YRIMRQNALL LERKPAVPPS KRAHTGRVAV KESNQRWCSD GFEFCCDNGE
     RLRVTFALDC CDREALHWAV TTGGFNSETV QDVMLGAVER RFGNDLPSSP VEWLTDNGSC
     YRANETRQFA RMLGLEPKNT AVRSPESNGI AESFVKTIKR DYISIMPKPD GLTAAKNLAE
     AFEHYNEWHP HSALGYRSPR EYLRQRACNG LSDNRCLEI
//

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