(data stored in SCRATCH zone)

SWISSPROT: Q4WDK8_ASPFU

ID   Q4WDK8_ASPFU            Unreviewed;       815 AA.
AC   Q4WDK8;
DT   05-JUL-2005, integrated into UniProtKB/TrEMBL.
DT   05-JUL-2005, sequence version 1.
DT   11-DEC-2019, entry version 104.
DE   SubName: Full=RNA polymerase II Elongator subunit, putative {ECO:0000313|EMBL:EAL85530.1};
GN   ORFNames=AFUA_6G05090 {ECO:0000313|EMBL:EAL85530.1};
OS   Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC
OS   A1100) (Aspergillus fumigatus).
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC   Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus.
OX   NCBI_TaxID=330879 {ECO:0000313|EMBL:EAL85530.1, ECO:0000313|Proteomes:UP000002530};
RN   [1] {ECO:0000313|EMBL:EAL85530.1, ECO:0000313|Proteomes:UP000002530}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100
RC   {ECO:0000313|Proteomes:UP000002530};
RX   PubMed=16372009; DOI=10.1038/nature04332;
RA   Nierman W.C., Pain A., Anderson M.J., Wortman J.R., Kim H.S., Arroyo J.,
RA   Berriman M., Abe K., Archer D.B., Bermejo C., Bennett J., Bowyer P.,
RA   Chen D., Collins M., Coulsen R., Davies R., Dyer P.S., Farman M.,
RA   Fedorova N., Fedorova N., Feldblyum T.V., Fischer R., Fosker N., Fraser A.,
RA   Garcia J.L., Garcia M.J., Goble A., Goldman G.H., Gomi K.,
RA   Griffith-Jones S., Gwilliam R., Haas B., Haas H., Harris D., Horiuchi H.,
RA   Huang J., Humphray S., Jimenez J., Keller N., Khouri H., Kitamoto K.,
RA   Kobayashi T., Konzack S., Kulkarni R., Kumagai T., Lafon A., Latge J.P.,
RA   Li W., Lord A., Lu C., Majoros W.H., May G.S., Miller B.L., Mohamoud Y.,
RA   Molina M., Monod M., Mouyna I., Mulligan S., Murphy L., O'Neil S.,
RA   Paulsen I., Penalva M.A., Pertea M., Price C., Pritchard B.L., Quail M.A.,
RA   Rabbinowitsch E., Rawlins N., Rajandream M.A., Reichard U., Renauld H.,
RA   Robson G.D., Rodriguez de Cordoba S., Rodriguez-Pena J.M., Ronning C.M.,
RA   Rutter S., Salzberg S.L., Sanchez M., Sanchez-Ferrero J.C., Saunders D.,
RA   Seeger K., Squares R., Squares S., Takeuchi M., Tekaia F., Turner G.,
RA   Vazquez de Aldana C.R., Weidman J., White O., Woodward J., Yu J.H.,
RA   Fraser C., Galagan J.E., Asai K., Machida M., Hall N., Barrell B.,
RA   Denning D.W.;
RT   "Genomic sequence of the pathogenic and allergenic filamentous fungus
RT   Aspergillus fumigatus.";
RL   Nature 438:1151-1156(2005).
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:EAL85530.1}.
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DR   EMBL; AAHF01000012; EAL85530.1; -; Genomic_DNA.
DR   RefSeq; XP_747568.1; XM_742475.1.
DR   STRING; 746128.CADAFUBP00009056; -.
DR   EnsemblFungi; EAL85530; EAL85530; AFUA_6G05090.
DR   GeneID; 3505044; -.
DR   KEGG; afm:AFUA_6G05090; -.
DR   EuPathDB; FungiDB:Afu6g05090; -.
DR   HOGENOM; HOG000200623; -.
DR   InParanoid; Q4WDK8; -.
DR   KO; K11374; -.
DR   OMA; QAHHLTV; -.
DR   OrthoDB; 461632at2759; -.
DR   Proteomes; UP000002530; Chromosome 6.
DR   GO; GO:0033588; C:Elongator holoenzyme complex; IBA:GO_Central.
DR   GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR   GO; GO:0008023; C:transcription elongation factor complex; IBA:GO_Central.
DR   GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR   GO; GO:0002098; P:tRNA wobble uridine modification; IEA:InterPro.
DR   Gene3D; 2.130.10.10; -; 4.
DR   InterPro; IPR037289; Elp2.
DR   InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR   InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR   InterPro; IPR001680; WD40_repeat.
DR   InterPro; IPR017986; WD40_repeat_dom.
DR   InterPro; IPR036322; WD40_repeat_dom_sf.
DR   PANTHER; PTHR44111; PTHR44111; 1.
DR   Pfam; PF00400; WD40; 5.
DR   PRINTS; PR00320; GPROTEINBRPT.
DR   SMART; SM00320; WD40; 12.
DR   SUPFAM; SSF50978; SSF50978; 3.
DR   PROSITE; PS50082; WD_REPEATS_2; 6.
DR   PROSITE; PS50294; WD_REPEATS_REGION; 4.
PE   4: Predicted;
DR   PRODOM; Q4WDK8.
DR   SWISS-2DPAGE; Q4WDK8.
KW   Reference proteome {ECO:0000313|Proteomes:UP000002530};
KW   WD repeat {ECO:0000256|PROSITE-ProRule:PRU00221}.
FT   DOMAIN          28..146
FT                   /note="WD_REPEATS_REGION"
FT                   /evidence="ECO:0000259|PROSITE:PS50294"
FT   REPEAT          54..99
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          105..146
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          213..260
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   DOMAIN          213..260
FT                   /note="WD_REPEATS_REGION"
FT                   /evidence="ECO:0000259|PROSITE:PS50294"
FT   DOMAIN          299..435
FT                   /note="WD_REPEATS_REGION"
FT                   /evidence="ECO:0000259|PROSITE:PS50294"
FT   REPEAT          299..333
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          405..435
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   DOMAIN          573..712
FT                   /note="WD_REPEATS_REGION"
FT                   /evidence="ECO:0000259|PROSITE:PS50294"
FT   REPEAT          669..703
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
SQ   SEQUENCE   815 AA;  89252 MW;  034B54CA99C28705 CRC64;
     MASITTEYIS VGGNRHPAAA DWDVQLGVLA FGADNNVALW NPSDASQRGV YALLVGHTDK
     VSAVRFYTCP ATGTKLLLTG SIDQTIRIWR ADTVDPTKFA HAHTLTGHTG SVNTIAVADG
     VAIIASGAAD GTVKIWKIDT QETVIRADLF QSLTMKPRFF PLALSLKPLS TPLSTELKDK
     PVVLAVAGTM NNVQVYVSED TLAGANFRLS ATLSGHEAWV RSLSFTEDKQ SKSGDLLLAS
     ASQDKYIRLW RLQRGEATKS ALSDDADPML GGLETTLSNK AHQFEAAGSK YSVTFEALLF
     GNEDWIYTAC WNPSTERQQL LSASADNTLT IWEQDPVSGV WLSVERMGEI SVQKGSTTAT
     GSTGGFWIGL WSPNGRQVVS LGRTGSWRAW RYDADRDMWL QALGITGHVR SVNGVQWEPT
     GGYLLSTSAD QTTRLHAEWL REGLKSWHEF SRPQIHGYDL NCIDILGPAR FVSGADEKLL
     RVFNEPKPIA QLLEKLAGFK PGTDEELPDT AQIPVLGLSN QAVGDDIPME VDEESAAGAR
     QVQANQAMIS NLWHPPLEDQ LARYTLWPEH EKLYGHGYEI SAVAVNHDRT LVATACKASS
     IDHAVIRLYD TSDWREIRPS LKAHSLTITS LCFSSDDRYL LSVGRDRQWA VFLRSGQDPS
     SFSLLTSNPK GHSRMILDAA WAPQVAKPVF ATAGRDKSIK LWEKVQDSFT CKTTISLENS
     VTAVSILPSI LDASFFLAAG EESGKLSIYQ VTVDGLEARH IATVDRSVSP SRAITQLSWR
     PSHRTDVRDT QSRFELAVAS EDSSVRVYAI SNMLS
//

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