(data stored in SCRATCH zone)

SWISSPROT: Q4ZZ94_PSEU2

ID   Q4ZZ94_PSEU2            Unreviewed;       629 AA.
AC   Q4ZZ94;
DT   07-JUN-2005, integrated into UniProtKB/TrEMBL.
DT   07-JUN-2005, sequence version 1.
DT   08-MAY-2019, entry version 97.
DE   RecName: Full=ATP-dependent RNA helicase RhlE {ECO:0000256|HAMAP-Rule:MF_00968};
DE            EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00968};
GN   Name=rhlE {ECO:0000256|HAMAP-Rule:MF_00968};
GN   OrderedLocusNames=Psyr_0458 {ECO:0000313|EMBL:AAY35528.1};
OS   Pseudomonas syringae pv. syringae (strain B728a).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC   Pseudomonadaceae; Pseudomonas; Pseudomonas syringae.
OX   NCBI_TaxID=205918 {ECO:0000313|EMBL:AAY35528.1, ECO:0000313|Proteomes:UP000000426};
RN   [1] {ECO:0000313|EMBL:AAY35528.1, ECO:0000313|Proteomes:UP000000426}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=B728a {ECO:0000313|EMBL:AAY35528.1,
RC   ECO:0000313|Proteomes:UP000000426};
RX   PubMed=16043691; DOI=10.1073/pnas.0504930102;
RA   Feil H., Feil W.S., Chain P., Larimer F., Dibartolo G., Copeland A.,
RA   Lykidis A., Trong S., Nolan M., Goltsman E., Thiel J., Malfatti S.,
RA   Loper J.E., Lapidus A., Detter J.C., Land M., Richardson P.M.,
RA   Kyrpides N.C., Ivanova N., Lindow S.E.;
RT   "Comparison of the complete genome sequences of Pseudomonas syringae
RT   pv. syringae B728a and pv. tomato DC3000.";
RL   Proc. Natl. Acad. Sci. U.S.A. 102:11064-11069(2005).
CC   -!- FUNCTION: DEAD-box RNA helicase involved in ribosome assembly. Has
CC       RNA-dependent ATPase activity and unwinds double-stranded RNA.
CC       {ECO:0000256|HAMAP-Rule:MF_00968}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065,
CC         ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC         ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.13;
CC         Evidence={ECO:0000256|HAMAP-Rule:MF_00968};
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|HAMAP-Rule:MF_00968}.
CC   -!- SIMILARITY: Belongs to the DEAD box helicase family. RhlE
CC       subfamily. {ECO:0000256|HAMAP-Rule:MF_00968}.
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DR   EMBL; CP000075; AAY35528.1; -; Genomic_DNA.
DR   RefSeq; WP_011266416.1; NC_007005.1.
DR   RefSeq; YP_233566.1; NC_007005.1.
DR   STRING; 205918.Psyr_0458; -.
DR   EnsemblBacteria; AAY35528; AAY35528; Psyr_0458.
DR   GeneID; 3365934; -.
DR   KEGG; psb:Psyr_0458; -.
DR   PATRIC; fig|205918.7.peg.476; -.
DR   eggNOG; ENOG4107R42; Bacteria.
DR   eggNOG; COG0513; LUCA.
DR   HOGENOM; HOG000268807; -.
DR   KO; K11927; -.
DR   OMA; ISIFRFP; -.
DR   BioCyc; PSYR205918:G1G4J-459-MONOMER; -.
DR   Proteomes; UP000000426; Chromosome.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0004004; F:ATP-dependent RNA helicase activity; IEA:UniProtKB-UniRule.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0042255; P:ribosome assembly; IEA:InterPro.
DR   CDD; cd00079; HELICc; 1.
DR   HAMAP; MF_00968; DEAD_helicase_RhlE; 1.
DR   InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR   InterPro; IPR028622; DEAD_helicase_RhlE.
DR   InterPro; IPR014001; Helicase_ATP-bd.
DR   InterPro; IPR001650; Helicase_C.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR000629; RNA-helicase_DEAD-box_CS.
DR   InterPro; IPR014014; RNA_helicase_DEAD_Q_motif.
DR   Pfam; PF00270; DEAD; 1.
DR   Pfam; PF00271; Helicase_C; 1.
DR   SMART; SM00487; DEXDc; 1.
DR   SMART; SM00490; HELICc; 1.
DR   SUPFAM; SSF52540; SSF52540; 2.
DR   PROSITE; PS00039; DEAD_ATP_HELICASE; 1.
DR   PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR   PROSITE; PS51194; HELICASE_CTER; 1.
DR   PROSITE; PS51195; Q_MOTIF; 1.
PE   3: Inferred from homology;
DR   PRODOM; Q4ZZ94.
DR   SWISS-2DPAGE; Q4ZZ94.
KW   ATP-binding {ECO:0000256|HAMAP-Rule:MF_00968,
KW   ECO:0000256|RuleBase:RU000492};
KW   Complete proteome {ECO:0000313|Proteomes:UP000000426};
KW   Cytoplasm {ECO:0000256|HAMAP-Rule:MF_00968};
KW   Helicase {ECO:0000256|HAMAP-Rule:MF_00968,
KW   ECO:0000256|RuleBase:RU000492, ECO:0000313|EMBL:AAY35528.1};
KW   Hydrolase {ECO:0000256|HAMAP-Rule:MF_00968,
KW   ECO:0000256|RuleBase:RU000492};
KW   Nucleotide-binding {ECO:0000256|HAMAP-Rule:MF_00968,
KW   ECO:0000256|RuleBase:RU000492};
KW   Ribosome biogenesis {ECO:0000256|HAMAP-Rule:MF_00968}.
FT   DOMAIN        1     29       Q_MOTIF. {ECO:0000259|PROSITE:PS51195}.
FT   DOMAIN       32    212       Helicase ATP-binding.
FT                                {ECO:0000259|PROSITE:PS51192}.
FT   DOMAIN      238    383       Helicase C-terminal.
FT                                {ECO:0000259|PROSITE:PS51194}.
FT   MOTIF         1     29       Q motif. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00552}.
SQ   SEQUENCE   629 AA;  68033 MW;  0BAB0621E4C41533 CRC64;
     MSFASLGLSE ALVRAIEAAG YTQPTPVQQR AIPAVLQGRD LMVAAQTGTG KTGGFALPIL
     ERLFPNGVPD KSQRHGPRQP RVLVLTPTRE LAAQVHESFK LYARDLKFVS ACIFGGVGMN
     PQVQAMSRGV DVLVACPGRL LDLAGQGSVD LSHVEILVLD EADRMLDMGF VHDVKKVLAR
     LPAKRQNLLF SATFSNDITS LAGKLLHNPE RIEVTPPNTT VERIEQRVFR LAANHKRSLL
     AHLITVGAWE QVLVFTRTKH GANRLAEYLD KHGLAAVAIH GNKSQNARTK ALADFKAGDV
     RIMVATDIAA RGLDIDQLPH VVNFELPNVD EDYVHRIGRT GRAGRSGEAI SLVAPDEEKL
     LKSIERMTKQ KIADGDLMGF DITAVEAEKP EVRERPDVRN SRGARPARGD GDKNNGGRRD
     KGKDKGKEKP AAASATGERP ARQPREKKPR EGTPRSEQRA SQPATPRPAA DRAPDEFRDD
     EVDNFGNRAD YVSPYQGKGQ NRGRRPAAAP GAAAPAAGGA ARPANPGRPA GGARNGSGSG
     APKRNGSGSS APRSRDGQPR GRRPAREDQP LPREGQEPAA RAPRDGQPQP KIVHKESKID
     RFPSAEQLDQ LPSRPRGEKP ALLTRNRDS
//

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