(data stored in SCRATCH zone)

SWISSPROT: Q5BD42_EMENI

ID   Q5BD42_EMENI            Unreviewed;       357 AA.
AC   Q5BD42; C8VMX5;
DT   26-APR-2005, integrated into UniProtKB/TrEMBL.
DT   26-APR-2005, sequence version 1.
DT   05-JUL-2017, entry version 87.
DE   SubName: Full=Transcription initiation factor iif, beta subunit (AFU_orthologue AFUA_8G05490) {ECO:0000313|EMBL:CBF85067.1};
GN   ORFNames=ANIA_01538 {ECO:0000313|EMBL:CBF85067.1};
OS   Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL
OS   194 / M139) (Aspergillus nidulans).
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC   Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus.
OX   NCBI_TaxID=227321 {ECO:0000313|EMBL:CBF85067.1, ECO:0000313|Proteomes:UP000000560};
RN   [1] {ECO:0000313|Proteomes:UP000000560}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139
RC   {ECO:0000313|Proteomes:UP000000560};
RX   PubMed=16372000; DOI=10.1038/nature04341;
RA   Galagan J.E., Calvo S.E., Cuomo C., Ma L.J., Wortman J.R.,
RA   Batzoglou S., Lee S.I., Basturkmen M., Spevak C.C., Clutterbuck J.,
RA   Kapitonov V., Jurka J., Scazzocchio C., Farman M., Butler J.,
RA   Purcell S., Harris S., Braus G.H., Draht O., Busch S., D'Enfert C.,
RA   Bouchier C., Goldman G.H., Bell-Pedersen D., Griffiths-Jones S.,
RA   Doonan J.H., Yu J., Vienken K., Pain A., Freitag M., Selker E.U.,
RA   Archer D.B., Penalva M.A., Oakley B.R., Momany M., Tanaka T.,
RA   Kumagai T., Asai K., Machida M., Nierman W.C., Denning D.W.,
RA   Caddick M., Hynes M., Paoletti M., Fischer R., Miller B., Dyer P.,
RA   Sachs M.S., Osmani S.A., Birren B.W.;
RT   "Sequencing of Aspergillus nidulans and comparative analysis with A.
RT   fumigatus and A. oryzae.";
RL   Nature 438:1105-1115(2005).
RN   [2] {ECO:0000313|Proteomes:UP000000560}
RP   GENOME REANNOTATION.
RC   STRAIN=FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139
RC   {ECO:0000313|Proteomes:UP000000560};
RX   PubMed=19146970; DOI=10.1016/j.fgb.2008.12.003;
RA   Wortman J.R., Gilsenan J.M., Joardar V., Deegan J., Clutterbuck J.,
RA   Andersen M.R., Archer D., Bencina M., Braus G., Coutinho P.,
RA   von Dohren H., Doonan J., Driessen A.J., Durek P., Espeso E.,
RA   Fekete E., Flipphi M., Estrada C.G., Geysens S., Goldman G.,
RA   de Groot P.W., Hansen K., Harris S.D., Heinekamp T., Helmstaedt K.,
RA   Henrissat B., Hofmann G., Homan T., Horio T., Horiuchi H., James S.,
RA   Jones M., Karaffa L., Karanyi Z., Kato M., Keller N., Kelly D.E.,
RA   Kiel J.A., Kim J.M., van der Klei I.J., Klis F.M., Kovalchuk A.,
RA   Krasevec N., Kubicek C.P., Liu B., Maccabe A., Meyer V., Mirabito P.,
RA   Miskei M., Mos M., Mullins J., Nelson D.R., Nielsen J., Oakley B.R.,
RA   Osmani S.A., Pakula T., Paszewski A., Paulsen I., Pilsyk S., Pocsi I.,
RA   Punt P.J., Ram A.F., Ren Q., Robellet X., Robson G., Seiboth B.,
RA   van Solingen P., Specht T., Sun J., Taheri-Talesh N., Takeshita N.,
RA   Ussery D., vanKuyk P.A., Visser H., van de Vondervoort P.J.,
RA   de Vries R.P., Walton J., Xiang X., Xiong Y., Zeng A.P., Brandt B.W.,
RA   Cornell M.J., van den Hondel C.A., Visser J., Oliver S.G., Turner G.;
RT   "The 2008 update of the Aspergillus nidulans genome annotation: a
RT   community effort.";
RL   Fungal Genet. Biol. 46:S2-13(2009).
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DR   EMBL; BN001307; CBF85067.1; -; Genomic_DNA.
DR   RefSeq; XP_659142.1; XM_654050.1.
DR   STRING; 162425.CADANIAP00008165; -.
DR   EnsemblFungi; CADANIAT00008165; CADANIAP00008165; CADANIAG00008165.
DR   EnsemblFungi; EAA64245; EAA64245; AN1538.2.
DR   GeneID; 2875661; -.
DR   KEGG; ani:AN1538.2; -.
DR   HOGENOM; HOG000158361; -.
DR   KO; K03139; -.
DR   OMA; KTTRMPQ; -.
DR   OrthoDB; EOG092C4JNL; -.
DR   Proteomes; UP000000560; Chromosome VII.
DR   GO; GO:0005674; C:transcription factor TFIIF complex; IBA:GO_Central.
DR   GO; GO:0003824; F:catalytic activity; IEA:InterPro.
DR   GO; GO:0000991; F:transcription factor activity, core RNA polymerase II binding; IBA:GO_Central.
DR   GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
DR   GO; GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; IBA:GO_Central.
DR   GO; GO:0060261; P:positive regulation of transcription initiation from RNA polymerase II promoter; IBA:GO_Central.
DR   GO; GO:0006367; P:transcription initiation from RNA polymerase II promoter; IEA:InterPro.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR003196; TFIIF_beta.
DR   InterPro; IPR011039; TFIIF_interaction.
DR   InterPro; IPR011991; WHTH_DNA-bd_dom.
DR   PANTHER; PTHR10445; PTHR10445; 1.
DR   Pfam; PF02270; TFIIF_beta; 1.
DR   SUPFAM; SSF46785; SSF46785; 1.
DR   SUPFAM; SSF50916; SSF50916; 1.
PE   4: Predicted;
DR   PRODOM; Q5BD42.
DR   SWISS-2DPAGE; Q5BD42.
KW   Complete proteome {ECO:0000313|Proteomes:UP000000560};
KW   Initiation factor {ECO:0000313|EMBL:CBF85067.1};
KW   Protein biosynthesis {ECO:0000313|EMBL:CBF85067.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000560}.
SQ   SEQUENCE   357 AA;  41719 MW;  889C0F1B6CF264A9 CRC64;
     MFSHIKQEHD ASSPYIKPDP ETKDTVLADI DDEDVYEDDG DLDFTNADQS LWLSRIPRSL
     WEHWSKLDDD DEIQIGTVSL RLTESEENRD IPKDYILSRQ TLNSENLLHM TQNTYLFTEK
     DIPGYENRMV TFGEARSALY ESMKRDARRK ERKKKWEPYI RKTIPKRTAL VGQVKEEFNC
     LPVENEEFRI LSEKKALEAL KPRREVKYVD KMPAKLLQQR HALPGEQGAF VQATKPAKLK
     AQENKTTRMP QNELLDLIYQ CFREYRYWPF KTLKARLRQP EAYLKQTLEM IAHLVKSGDF
     AMTWELKPEA RESNYSNAMD VKQEAAPGLD YNFDEGSETD AMASGVDNDD TQFENVV
//

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