(data stored in SCRATCH zone)

SWISSPROT: Q5LVR5_RUEPO

ID   Q5LVR5_RUEPO            Unreviewed;       835 AA.
AC   Q5LVR5;
DT   01-FEB-2005, integrated into UniProtKB/TrEMBL.
DT   01-FEB-2005, sequence version 1.
DT   08-MAY-2019, entry version 87.
DE   SubName: Full=Aminomethyl transferase family protein {ECO:0000313|EMBL:AAV93943.1};
GN   OrderedLocusNames=SPO0635 {ECO:0000313|EMBL:AAV93943.1};
OS   Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3)
OS   (Silicibacter pomeroyi).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
OC   Rhodobacteraceae; Ruegeria.
OX   NCBI_TaxID=246200 {ECO:0000313|EMBL:AAV93943.1, ECO:0000313|Proteomes:UP000001023};
RN   [1] {ECO:0000313|EMBL:AAV93943.1, ECO:0000313|Proteomes:UP000001023}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 700808 / DSM 15171 / DSS-3
RC   {ECO:0000313|Proteomes:UP000001023};
RX   PubMed=15602564; DOI=10.1038/nature03170;
RA   Moran M.A., Buchan A., Gonzalez J.M., Heidelberg J.F., Whitman W.B.,
RA   Kiene R.P., Henriksen J.R., King G.M., Belas R., Fuqua C., Brinkac L.,
RA   Lewis M., Johri S., Weaver B., Pai G., Eisen J.A., Rahe E.,
RA   Sheldon W.M., Ye W., Miller T.R., Carlton J., Rasko D.A.,
RA   Paulsen I.T., Ren Q., Daugherty S.C., Deboy R.T., Dodson R.J.,
RA   Durkin A.S., Madupu R., Nelson W.C., Sullivan S.A., Rosovitz M.J.,
RA   Haft D.H., Selengut J., Ward N.;
RT   "Genome sequence of Silicibacter pomeroyi reveals adaptations to the
RT   marine environment.";
RL   Nature 432:910-913(2004).
RN   [2] {ECO:0000313|EMBL:AAV93943.1, ECO:0000313|Proteomes:UP000001023}
RP   GENOME REANNOTATION.
RC   STRAIN=ATCC 700808 / DSM 15171 / DSS-3
RC   {ECO:0000313|Proteomes:UP000001023};
RX   PubMed=25780504; DOI=10.1186/1944-3277-9-11;
RA   Rivers A.R., Smith C.B., Moran M.A.;
RT   "An updated genome annotation for the model marine bacterium Ruegeria
RT   pomeroyi DSS-3.";
RL   Stand. Genomic Sci. 9:11-11(2014).
CC   -!- SIMILARITY: Belongs to the GcvT family.
CC       {ECO:0000256|SAAS:SAAS00998751}.
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DR   EMBL; CP000031; AAV93943.1; -; Genomic_DNA.
DR   RefSeq; WP_011046386.1; NC_003911.12.
DR   STRING; 246200.SPO0635; -.
DR   EnsemblBacteria; AAV93943; AAV93943; SPO0635.
DR   KEGG; sil:SPO0635; -.
DR   eggNOG; ENOG4105C5K; Bacteria.
DR   eggNOG; COG0404; LUCA.
DR   eggNOG; COG0665; LUCA.
DR   HOGENOM; HOG000251716; -.
DR   OMA; LPLFNMS; -.
DR   OrthoDB; 282830at2; -.
DR   BioCyc; RPOM246200:G1G48-646-MONOMER; -.
DR   Proteomes; UP000001023; Chromosome.
DR   GO; GO:0016491; F:oxidoreductase activity; IEA:InterPro.
DR   GO; GO:0016740; F:transferase activity; IEA:UniProtKB-KW.
DR   Gene3D; 3.30.1360.120; -; 1.
DR   Gene3D; 3.50.50.60; -; 1.
DR   InterPro; IPR006076; FAD-dep_OxRdtase.
DR   InterPro; IPR036188; FAD/NAD-bd_sf.
DR   InterPro; IPR032503; FAO_M.
DR   InterPro; IPR013977; GCV_T_C.
DR   InterPro; IPR006222; GCV_T_N.
DR   InterPro; IPR029043; GcvT/YgfZ_C.
DR   InterPro; IPR027266; TrmE/GcvT_dom1.
DR   Pfam; PF01266; DAO; 1.
DR   Pfam; PF16350; FAO_M; 1.
DR   Pfam; PF01571; GCV_T; 1.
DR   Pfam; PF08669; GCV_T_C; 1.
DR   SUPFAM; SSF101790; SSF101790; 1.
DR   SUPFAM; SSF51905; SSF51905; 1.
PE   3: Inferred from homology;
DR   PRODOM; Q5LVR5.
DR   SWISS-2DPAGE; Q5LVR5.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001023};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001023};
KW   Transferase {ECO:0000313|EMBL:AAV93943.1}.
FT   DOMAIN        7    381       DAO. {ECO:0000259|Pfam:PF01266}.
FT   DOMAIN      384    438       FAO_M. {ECO:0000259|Pfam:PF16350}.
FT   DOMAIN      442    722       GCV_T. {ECO:0000259|Pfam:PF01571}.
FT   DOMAIN      746    825       GCV_T_C. {ECO:0000259|Pfam:PF08669}.
SQ   SEQUENCE   835 AA;  93218 MW;  C570DEFE2A0AD8C4 CRC64;
     MKTQVKALVV GGGAVGTSIA YHLAKAGWND VMLIERDELT SGSTWHAAGL LPLFNMSYAT
     THIHQYSVDF YKTLEEETGL NAGFAVVGNL RMAQTQDRMD EYMLYASTAE TCGVKYEWLT
     PDQIKERWPL IETSDLKGAI YHTEDGYINP ADVTQAMAKG ARQRGVDIVR KMQADAFHWN
     GTHWEVTCTK MVEKGGNLVP SDEQVVITAE HVVTASGNHA QRTAKLLGIK MPAIPVEHTF
     IVMDQDPELV KWREAGNPEH PVVRDADNES YAREERGGWI LGIYEHGAPA RFEYGVPDSF
     RADLFPLDLD RIADQYMAMA ERVPSCAESG LKDDFNGPIC YTPDGNPLVG PAPGLRNMWL
     AEGFSFGITA AGGTGYYLAQ MMVDGEAEID MASLDPKRYS SNWMTTEFAA RKNEECYSHV
     YILHHPDEER EACRPLRTAP AYDRQKALGA QFGFVNGWER PNYYGPLDAP ENFDHDARSF
     RRGGWWQYAV EEAKAIRNGV GLIDATAFTK HVVKGPGATQ FLDWFTCNKL PKVGRINLTY
     ALTSAGTTRT EYTIVRNGEN NYYIVSAGAW TEYDADFLRK AAEDKMEEFG YIEIQDVTTQ
     WGVFAIAGPK SRDVLKEVIK DADPETALSN KRFPWLSARQ IELGMCPVNA IRVAYTGELG
     WELHHPIEMQ RYLWDLLLAA GEKHGMKLVG ARAQNWLRQE KSYRAFGTEL GRDATPLEAD
     LPRFVDLGKD FHGKAEMEAK GIRSKCCTLL IDGPSDADPW GREALYTPEG ARVGRLTSGG
     YSVAFEKSIG MGYVKPELAV EGTKLKVKML DQLWDAVVTC DSPYDPKNET IRKDG
//

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