(data stored in SCRATCH zone)

SWISSPROT: Q5LVS1_RUEPO

ID   Q5LVS1_RUEPO            Unreviewed;       171 AA.
AC   Q5LVS1;
DT   01-FEB-2005, integrated into UniProtKB/TrEMBL.
DT   01-FEB-2005, sequence version 1.
DT   08-MAY-2019, entry version 67.
DE   SubName: Full=Transposase, degenerate {ECO:0000313|EMBL:AAV93937.1};
GN   OrderedLocusNames=SPO0628 {ECO:0000313|EMBL:AAV93937.1};
OS   Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3)
OS   (Silicibacter pomeroyi).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
OC   Rhodobacteraceae; Ruegeria.
OX   NCBI_TaxID=246200 {ECO:0000313|EMBL:AAV93937.1, ECO:0000313|Proteomes:UP000001023};
RN   [1] {ECO:0000313|EMBL:AAV93937.1, ECO:0000313|Proteomes:UP000001023}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 700808 / DSM 15171 / DSS-3
RC   {ECO:0000313|Proteomes:UP000001023};
RX   PubMed=15602564; DOI=10.1038/nature03170;
RA   Moran M.A., Buchan A., Gonzalez J.M., Heidelberg J.F., Whitman W.B.,
RA   Kiene R.P., Henriksen J.R., King G.M., Belas R., Fuqua C., Brinkac L.,
RA   Lewis M., Johri S., Weaver B., Pai G., Eisen J.A., Rahe E.,
RA   Sheldon W.M., Ye W., Miller T.R., Carlton J., Rasko D.A.,
RA   Paulsen I.T., Ren Q., Daugherty S.C., Deboy R.T., Dodson R.J.,
RA   Durkin A.S., Madupu R., Nelson W.C., Sullivan S.A., Rosovitz M.J.,
RA   Haft D.H., Selengut J., Ward N.;
RT   "Genome sequence of Silicibacter pomeroyi reveals adaptations to the
RT   marine environment.";
RL   Nature 432:910-913(2004).
RN   [2] {ECO:0000313|EMBL:AAV93937.1, ECO:0000313|Proteomes:UP000001023}
RP   GENOME REANNOTATION.
RC   STRAIN=ATCC 700808 / DSM 15171 / DSS-3
RC   {ECO:0000313|Proteomes:UP000001023};
RX   PubMed=25780504; DOI=10.1186/1944-3277-9-11;
RA   Rivers A.R., Smith C.B., Moran M.A.;
RT   "An updated genome annotation for the model marine bacterium Ruegeria
RT   pomeroyi DSS-3.";
RL   Stand. Genomic Sci. 9:11-11(2014).
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DR   EMBL; CP000031; AAV93937.1; -; Genomic_DNA.
DR   EnsemblBacteria; AAV93937; AAV93937; SPO0628.
DR   KEGG; sil:SPO0628; -.
DR   eggNOG; ENOG4105D4K; Bacteria.
DR   eggNOG; COG2801; LUCA.
DR   HOGENOM; HOG000023134; -.
DR   Proteomes; UP000001023; Chromosome.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR   GO; GO:0032196; P:transposition; IEA:InterPro.
DR   Gene3D; 3.30.420.10; -; 1.
DR   InterPro; IPR001584; Integrase_cat-core.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR036397; RNaseH_sf.
DR   Pfam; PF00665; rve; 1.
DR   SUPFAM; SSF53098; SSF53098; 1.
DR   PROSITE; PS50994; INTEGRASE; 1.
PE   4: Predicted;
DR   PRODOM; Q5LVS1.
DR   SWISS-2DPAGE; Q5LVS1.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001023};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001023}.
FT   DOMAIN        1    161       Integrase catalytic.
FT                                {ECO:0000259|PROSITE:PS50994}.
SQ   SEQUENCE   171 AA;  18732 MW;  5F192E7D86D1DBB0 CRC64;
     MLWVSDFTYV ATWKGFVYVA FVIDAHARKI VGWRVSTSAQ TGFVLDALEQ AVHDRKPTKA
     MGLVHHNDRG SQYLSIRYTE RLADAGIEPS VGSVGDCYDN ALAETSMASS RLRLSIAAAL
     GAASRQWNTR LWNGSAGSTT AAFPSPSGTS RQPKLRQTST RLGKLKTWPR N
//

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