(data stored in SCRATCH zone)

SWISSPROT: Q5LVS9_RUEPO

ID   Q5LVS9_RUEPO            Unreviewed;       330 AA.
AC   Q5LVS9;
DT   01-FEB-2005, integrated into UniProtKB/TrEMBL.
DT   01-FEB-2005, sequence version 1.
DT   08-MAY-2019, entry version 85.
DE   SubName: Full=Oxidoreductase, zinc-binding dehydrogenase family {ECO:0000313|EMBL:AAV93930.1};
GN   OrderedLocusNames=SPO0616 {ECO:0000313|EMBL:AAV93930.1};
OS   Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3)
OS   (Silicibacter pomeroyi).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
OC   Rhodobacteraceae; Ruegeria.
OX   NCBI_TaxID=246200 {ECO:0000313|EMBL:AAV93930.1, ECO:0000313|Proteomes:UP000001023};
RN   [1] {ECO:0000313|EMBL:AAV93930.1, ECO:0000313|Proteomes:UP000001023}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 700808 / DSM 15171 / DSS-3
RC   {ECO:0000313|Proteomes:UP000001023};
RX   PubMed=15602564; DOI=10.1038/nature03170;
RA   Moran M.A., Buchan A., Gonzalez J.M., Heidelberg J.F., Whitman W.B.,
RA   Kiene R.P., Henriksen J.R., King G.M., Belas R., Fuqua C., Brinkac L.,
RA   Lewis M., Johri S., Weaver B., Pai G., Eisen J.A., Rahe E.,
RA   Sheldon W.M., Ye W., Miller T.R., Carlton J., Rasko D.A.,
RA   Paulsen I.T., Ren Q., Daugherty S.C., Deboy R.T., Dodson R.J.,
RA   Durkin A.S., Madupu R., Nelson W.C., Sullivan S.A., Rosovitz M.J.,
RA   Haft D.H., Selengut J., Ward N.;
RT   "Genome sequence of Silicibacter pomeroyi reveals adaptations to the
RT   marine environment.";
RL   Nature 432:910-913(2004).
RN   [2] {ECO:0000313|EMBL:AAV93930.1, ECO:0000313|Proteomes:UP000001023}
RP   GENOME REANNOTATION.
RC   STRAIN=ATCC 700808 / DSM 15171 / DSS-3
RC   {ECO:0000313|Proteomes:UP000001023};
RX   PubMed=25780504; DOI=10.1186/1944-3277-9-11;
RA   Rivers A.R., Smith C.B., Moran M.A.;
RT   "An updated genome annotation for the model marine bacterium Ruegeria
RT   pomeroyi DSS-3.";
RL   Stand. Genomic Sci. 9:11-11(2014).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; CP000031; AAV93930.1; -; Genomic_DNA.
DR   RefSeq; WP_011046372.1; NC_003911.12.
DR   STRING; 246200.SPO0616; -.
DR   EnsemblBacteria; AAV93930; AAV93930; SPO0616.
DR   KEGG; sil:SPO0616; -.
DR   eggNOG; ENOG4107URS; Bacteria.
DR   eggNOG; COG0604; LUCA.
DR   HOGENOM; HOG000294672; -.
DR   KO; K00344; -.
DR   OMA; PTDWKSR; -.
DR   OrthoDB; 831053at2; -.
DR   BioCyc; RPOM246200:G1G48-624-MONOMER; -.
DR   Proteomes; UP000001023; Chromosome.
DR   GO; GO:0016491; F:oxidoreductase activity; IEA:InterPro.
DR   InterPro; IPR013149; ADH_C.
DR   InterPro; IPR013154; ADH_N.
DR   InterPro; IPR011032; GroES-like_sf.
DR   InterPro; IPR036291; NAD(P)-bd_dom_sf.
DR   InterPro; IPR020843; PKS_ER.
DR   Pfam; PF08240; ADH_N; 1.
DR   Pfam; PF00107; ADH_zinc_N; 1.
DR   SMART; SM00829; PKS_ER; 1.
DR   SUPFAM; SSF50129; SSF50129; 1.
DR   SUPFAM; SSF51735; SSF51735; 1.
PE   4: Predicted;
DR   PRODOM; Q5LVS9.
DR   SWISS-2DPAGE; Q5LVS9.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001023};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001023}.
FT   DOMAIN       11    326       PKS_ER. {ECO:0000259|SMART:SM00829}.
SQ   SEQUENCE   330 AA;  33596 MW;  D3A87B2E44D77C26 CRC64;
     MKAVLYRAFG AARDVLTLEE FPAPRPGPGE VLVDLAFSGV NPSDVKARAG ARAGVTELPY
     PAIVPHSDGS GVIRAVGEGV DVARVGERVW LWNGQWGRAM GTCAEQIALP AEQAVPLPQD
     VSLETGAVLG IPGLTAAHVV FSGGPVSGKT LLVQGGAGTV GFLAVQLAKW GGARVIATAS
     AGAAERVRAA GADAVLDYAA PDLAAAVLAA NDGAPVDRIV EVEFGANAEV DAAVIAPNGR
     INAYGSARQM APVLPFYPLM FKSVTLEMTL VYLLDTANRQ AAIGHLHSAL SAGALSCPVQ
     EIYALDAAAA AHEAVERGAR SGAILVRTSG
//

If you have problems or comments...

PBIL Back to PBIL home page