(data stored in SCRATCH zone)

SWISSPROT: Q5LVT0_RUEPO

ID   Q5LVT0_RUEPO            Unreviewed;       377 AA.
AC   Q5LVT0;
DT   01-FEB-2005, integrated into UniProtKB/TrEMBL.
DT   01-FEB-2005, sequence version 1.
DT   16-JAN-2019, entry version 60.
DE   SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AAV97129.1};
GN   OrderedLocusNames=SPO0615 {ECO:0000313|EMBL:AAV97129.1};
OS   Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3)
OS   (Silicibacter pomeroyi).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
OC   Rhodobacteraceae; Ruegeria.
OX   NCBI_TaxID=246200 {ECO:0000313|EMBL:AAV97129.1, ECO:0000313|Proteomes:UP000001023};
RN   [1] {ECO:0000313|EMBL:AAV97129.1, ECO:0000313|Proteomes:UP000001023}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 700808 / DSM 15171 / DSS-3
RC   {ECO:0000313|Proteomes:UP000001023};
RX   PubMed=15602564; DOI=10.1038/nature03170;
RA   Moran M.A., Buchan A., Gonzalez J.M., Heidelberg J.F., Whitman W.B.,
RA   Kiene R.P., Henriksen J.R., King G.M., Belas R., Fuqua C., Brinkac L.,
RA   Lewis M., Johri S., Weaver B., Pai G., Eisen J.A., Rahe E.,
RA   Sheldon W.M., Ye W., Miller T.R., Carlton J., Rasko D.A.,
RA   Paulsen I.T., Ren Q., Daugherty S.C., Deboy R.T., Dodson R.J.,
RA   Durkin A.S., Madupu R., Nelson W.C., Sullivan S.A., Rosovitz M.J.,
RA   Haft D.H., Selengut J., Ward N.;
RT   "Genome sequence of Silicibacter pomeroyi reveals adaptations to the
RT   marine environment.";
RL   Nature 432:910-913(2004).
RN   [2] {ECO:0000313|EMBL:AAV97129.1, ECO:0000313|Proteomes:UP000001023}
RP   GENOME REANNOTATION.
RC   STRAIN=ATCC 700808 / DSM 15171 / DSS-3
RC   {ECO:0000313|Proteomes:UP000001023};
RX   PubMed=25780504; DOI=10.1186/1944-3277-9-11;
RA   Rivers A.R., Smith C.B., Moran M.A.;
RT   "An updated genome annotation for the model marine bacterium Ruegeria
RT   pomeroyi DSS-3.";
RL   Stand. Genomic Sci. 9:11-11(2014).
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DR   EMBL; CP000031; AAV97129.1; -; Genomic_DNA.
DR   RefSeq; WP_011046371.1; NC_003911.12.
DR   STRING; 246200.SPO0615; -.
DR   EnsemblBacteria; AAV97129; AAV97129; SPO0615.
DR   KEGG; sil:SPO0615; -.
DR   HOGENOM; HOG000014318; -.
DR   OMA; RAYCECL; -.
DR   OrthoDB; 966864at2; -.
DR   BioCyc; RPOM246200:G1G48-623-MONOMER; -.
DR   Proteomes; UP000001023; Chromosome.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   InterPro; IPR008756; Peptidase_M56.
DR   Pfam; PF05569; Peptidase_M56; 1.
PE   4: Predicted;
DR   PRODOM; Q5LVT0.
DR   SWISS-2DPAGE; Q5LVT0.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001023};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001023};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM      6     27       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     47     70       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    115    137       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    316    335       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN      174    271       Peptidase_M56. {ECO:0000259|Pfam:
FT                                PF05569}.
SQ   SEQUENCE   377 AA;  42397 MW;  A6573E3D6B395717 CRC64;
     MDGEVLLNAY LDLNLLLVAG VAIWSLLRWA VAKTRLGTAY MPQLRLLNGL TVLLVASPLL
     AMAITTWIVA HPPNIPDLLV RQYLHGNVGL SASQFEALLG LREDMVRALL AQHEVWAQVV
     AAAFLAGALF CTLHMGLSVL RLSNSLRGAH LWKRIGRVHL LVSDTARVAY STRGLRNRYV
     VLPSALLEAP QDLRMTVAHE LQHFRQSDIE CEFLLELLRP LLFWNPAFFL WRRQVRMLRE
     YACDQALMAR PHFDMRAYCE CLFRACRVAA QNRVLFARTT PTVALVDRRE TRRPSTLHSR
     IEALTATRQD TAGPTAWLLI SGLLVASVLS TMLVMQRSSD WSHDRIMLST IVNLERMAQR
     NATVASPFQG GFVVATD
//

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