(data stored in SCRATCH zone)

SWISSPROT: Q5LVV7_RUEPO

ID   Q5LVV7_RUEPO            Unreviewed;       303 AA.
AC   Q5LVV7;
DT   01-FEB-2005, integrated into UniProtKB/TrEMBL.
DT   01-FEB-2005, sequence version 1.
DT   08-MAY-2019, entry version 95.
DE   SubName: Full=Transcriptional regulator, LysR family {ECO:0000313|EMBL:AAV93903.1};
GN   OrderedLocusNames=SPO0588 {ECO:0000313|EMBL:AAV93903.1};
OS   Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3)
OS   (Silicibacter pomeroyi).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
OC   Rhodobacteraceae; Ruegeria.
OX   NCBI_TaxID=246200 {ECO:0000313|EMBL:AAV93903.1, ECO:0000313|Proteomes:UP000001023};
RN   [1] {ECO:0000313|EMBL:AAV93903.1, ECO:0000313|Proteomes:UP000001023}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 700808 / DSM 15171 / DSS-3
RC   {ECO:0000313|Proteomes:UP000001023};
RX   PubMed=15602564; DOI=10.1038/nature03170;
RA   Moran M.A., Buchan A., Gonzalez J.M., Heidelberg J.F., Whitman W.B.,
RA   Kiene R.P., Henriksen J.R., King G.M., Belas R., Fuqua C., Brinkac L.,
RA   Lewis M., Johri S., Weaver B., Pai G., Eisen J.A., Rahe E.,
RA   Sheldon W.M., Ye W., Miller T.R., Carlton J., Rasko D.A.,
RA   Paulsen I.T., Ren Q., Daugherty S.C., Deboy R.T., Dodson R.J.,
RA   Durkin A.S., Madupu R., Nelson W.C., Sullivan S.A., Rosovitz M.J.,
RA   Haft D.H., Selengut J., Ward N.;
RT   "Genome sequence of Silicibacter pomeroyi reveals adaptations to the
RT   marine environment.";
RL   Nature 432:910-913(2004).
RN   [2] {ECO:0000313|EMBL:AAV93903.1, ECO:0000313|Proteomes:UP000001023}
RP   GENOME REANNOTATION.
RC   STRAIN=ATCC 700808 / DSM 15171 / DSS-3
RC   {ECO:0000313|Proteomes:UP000001023};
RX   PubMed=25780504; DOI=10.1186/1944-3277-9-11;
RA   Rivers A.R., Smith C.B., Moran M.A.;
RT   "An updated genome annotation for the model marine bacterium Ruegeria
RT   pomeroyi DSS-3.";
RL   Stand. Genomic Sci. 9:11-11(2014).
CC   -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC       {ECO:0000256|SAAS:SAAS01096700}.
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DR   EMBL; CP000031; AAV93903.1; -; Genomic_DNA.
DR   RefSeq; WP_011046344.1; NC_003911.12.
DR   EnsemblBacteria; AAV93903; AAV93903; SPO0588.
DR   KEGG; sil:SPO0588; -.
DR   eggNOG; ENOG4108QST; Bacteria.
DR   eggNOG; ENOG410ZC7K; LUCA.
DR   HOGENOM; HOG000103695; -.
DR   OMA; GFKRRVE; -.
DR   OrthoDB; 1591366at2; -.
DR   BioCyc; RPOM246200:G1G48-595-MONOMER; -.
DR   Proteomes; UP000001023; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   CDD; cd08417; PBP2_Nitroaromatics_like; 1.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   InterPro; IPR037402; YidZ_PBP2.
DR   Pfam; PF00126; HTH_1; 1.
DR   PRINTS; PR00039; HTHLYSR.
DR   SUPFAM; SSF46785; SSF46785; 1.
DR   PROSITE; PS50931; HTH_LYSR; 1.
PE   3: Inferred from homology;
DR   PRODOM; Q5LVV7.
DR   SWISS-2DPAGE; Q5LVV7.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001023};
KW   DNA-binding {ECO:0000256|SAAS:SAAS01096662};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001023};
KW   Transcription {ECO:0000256|SAAS:SAAS01096725};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS01096646}.
FT   DOMAIN        9     66       HTH lysR-type. {ECO:0000259|PROSITE:
FT                                PS50931}.
SQ   SEQUENCE   303 AA;  33504 MW;  E74DC727BFDF9EE0 CRC64;
     MSKFDFTDLD GKVLRCFLVI LEESSVSRAA DRLGVTQSAV SHTLAKLRAV LGDPLFVRSG
     QGLTPTERAL SLREPVQRVL DGIKSLTDAR PFDPLGEEMH FDIAANDLQR ELIFPELLCR
     ARAEGVRLSL GFVPSGVPDP ALLRSDRCQL VLTPLPPDGP DIYQRRLFTS PLQIYYDASH
     RSPPDSWQSY CAAEHVEVRF IDGRSANVVM RGVDQSQIRP PTVVLPHFGA IPAFVKGSDL
     ISTDTALMKL GPLATLDCAP LPFACDPVSI YMVWHERSTA DPAHRWLRAR VEAIAARLQR
     SAQ
//

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