(data stored in SCRATCH zone)

SWISSPROT: Q5LWH5_RUEPO

ID   Q5LWH5_RUEPO            Unreviewed;       384 AA.
AC   Q5LWH5;
DT   01-FEB-2005, integrated into UniProtKB/TrEMBL.
DT   01-FEB-2005, sequence version 1.
DT   08-MAY-2019, entry version 92.
DE   SubName: Full=PolyA polymerase family protein {ECO:0000313|EMBL:AAV93357.1};
GN   OrderedLocusNames=SPO0026 {ECO:0000313|EMBL:AAV93357.1};
OS   Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3)
OS   (Silicibacter pomeroyi).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
OC   Rhodobacteraceae; Ruegeria.
OX   NCBI_TaxID=246200 {ECO:0000313|EMBL:AAV93357.1, ECO:0000313|Proteomes:UP000001023};
RN   [1] {ECO:0000313|EMBL:AAV93357.1, ECO:0000313|Proteomes:UP000001023}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 700808 / DSM 15171 / DSS-3
RC   {ECO:0000313|Proteomes:UP000001023};
RX   PubMed=15602564; DOI=10.1038/nature03170;
RA   Moran M.A., Buchan A., Gonzalez J.M., Heidelberg J.F., Whitman W.B.,
RA   Kiene R.P., Henriksen J.R., King G.M., Belas R., Fuqua C., Brinkac L.,
RA   Lewis M., Johri S., Weaver B., Pai G., Eisen J.A., Rahe E.,
RA   Sheldon W.M., Ye W., Miller T.R., Carlton J., Rasko D.A.,
RA   Paulsen I.T., Ren Q., Daugherty S.C., Deboy R.T., Dodson R.J.,
RA   Durkin A.S., Madupu R., Nelson W.C., Sullivan S.A., Rosovitz M.J.,
RA   Haft D.H., Selengut J., Ward N.;
RT   "Genome sequence of Silicibacter pomeroyi reveals adaptations to the
RT   marine environment.";
RL   Nature 432:910-913(2004).
RN   [2] {ECO:0000313|EMBL:AAV93357.1, ECO:0000313|Proteomes:UP000001023}
RP   GENOME REANNOTATION.
RC   STRAIN=ATCC 700808 / DSM 15171 / DSS-3
RC   {ECO:0000313|Proteomes:UP000001023};
RX   PubMed=25780504; DOI=10.1186/1944-3277-9-11;
RA   Rivers A.R., Smith C.B., Moran M.A.;
RT   "An updated genome annotation for the model marine bacterium Ruegeria
RT   pomeroyi DSS-3.";
RL   Stand. Genomic Sci. 9:11-11(2014).
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=a tRNA precursor + ATP + 2 CTP = a tRNA with a 3' CCA end
CC         + 3 diphosphate; Xref=Rhea:RHEA:14433, Rhea:RHEA-COMP:10465,
CC         Rhea:RHEA-COMP:10468, ChEBI:CHEBI:30616, ChEBI:CHEBI:33019,
CC         ChEBI:CHEBI:37563, ChEBI:CHEBI:74896, ChEBI:CHEBI:83071;
CC         EC=2.7.7.72; Evidence={ECO:0000256|SAAS:SAAS01116784};
CC   -!- SIMILARITY: Belongs to the tRNA nucleotidyltransferase/poly(A)
CC       polymerase family. {ECO:0000256|RuleBase:RU003953,
CC       ECO:0000256|SAAS:SAAS00577624}.
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DR   EMBL; CP000031; AAV93357.1; -; Genomic_DNA.
DR   RefSeq; WP_011045798.1; NC_003911.12.
DR   STRING; 246200.SPO0026; -.
DR   EnsemblBacteria; AAV93357; AAV93357; SPO0026.
DR   KEGG; sil:SPO0026; -.
DR   eggNOG; ENOG4105DJ0; Bacteria.
DR   eggNOG; COG0617; LUCA.
DR   HOGENOM; HOG000253345; -.
DR   KO; K00970; -.
DR   OMA; ATTRVCE; -.
DR   OrthoDB; 2018439at2; -.
DR   BioCyc; RPOM246200:G1G48-26-MONOMER; -.
DR   Proteomes; UP000001023; Chromosome.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0052929; F:ATP:3'-cytidine-cytidine-tRNA adenylyltransferase activity; IEA:UniProtKB-EC.
DR   GO; GO:0052928; F:CTP:3'-cytidine-tRNA cytidylyltransferase activity; IEA:UniProtKB-EC.
DR   GO; GO:0052927; F:CTP:tRNA cytidylyltransferase activity; IEA:UniProtKB-EC.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR   CDD; cd05398; NT_ClassII-CCAase; 1.
DR   InterPro; IPR002646; PolA_pol_head_dom.
DR   InterPro; IPR032828; PolyA_RNA-bd.
DR   Pfam; PF01743; PolyA_pol; 1.
DR   Pfam; PF12627; PolyA_pol_RNAbd; 1.
PE   3: Inferred from homology;
DR   PRODOM; Q5LWH5.
DR   SWISS-2DPAGE; Q5LWH5.
KW   ATP-binding {ECO:0000256|SAAS:SAAS00415369};
KW   Complete proteome {ECO:0000313|Proteomes:UP000001023};
KW   Nucleotide-binding {ECO:0000256|SAAS:SAAS00415411};
KW   Nucleotidyltransferase {ECO:0000256|SAAS:SAAS00415426};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001023};
KW   RNA-binding {ECO:0000256|RuleBase:RU003953,
KW   ECO:0000256|SAAS:SAAS00468387};
KW   Transferase {ECO:0000256|RuleBase:RU003953,
KW   ECO:0000256|SAAS:SAAS00468438}.
FT   DOMAIN       30    150       PolyA_pol. {ECO:0000259|Pfam:PF01743}.
FT   DOMAIN      184    240       PolyA_pol_RNAbd. {ECO:0000259|Pfam:
FT                                PF12627}.
SQ   SEQUENCE   384 AA;  40533 MW;  4CA0DCDE55533D0D CRC64;
     MTRIDEAWLT EPATQQVCRA LTEGGAQALF VGGCVRNALL GAPVSDIDIT TDAHPERVMA
     LAAAAGIKAV PTGIAHGTVT LVANSIPHEV TTFRRDVETD GRRAVVAFSD SIHEDAARRD
     FTMNALYARP DGTVLDPLDG LPDLQARRVR FIGDATDRIR EDYLRSLRYF RFHAWYGDAE
     AGFDAEALAA IAGNLDGLSR LSRERVGAEM LKLFAAPDPA PSVAAMRAAG VLAQLLPGAD
     DRALAPLVHL EDGLGADPIR RLAALGDGEA LASLRLSKAQ MALLDTLRRA ALGTAGAGEL
     GHELGVEAAR DALLLRAALL EQPLDPHAPA AIARGAAAVF PVTARDLMPA YSGPALGARL
     ATLKARWIAS DFSLSRAALL VDKD
//

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