(data stored in SCRATCH zone)

SWISSPROT: Q5LWK4_RUEPO

ID   Q5LWK4_RUEPO            Unreviewed;       258 AA.
AC   Q5LWK4;
DT   01-FEB-2005, integrated into UniProtKB/TrEMBL.
DT   01-FEB-2005, sequence version 1.
DT   16-JAN-2019, entry version 82.
DE   SubName: Full=ABC transporter, permease protein {ECO:0000313|EMBL:AAV93384.1};
GN   OrderedLocusNames=SPO0053 {ECO:0000313|EMBL:AAV93384.1};
OS   Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3)
OS   (Silicibacter pomeroyi).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
OC   Rhodobacteraceae; Ruegeria.
OX   NCBI_TaxID=246200 {ECO:0000313|EMBL:AAV93384.1, ECO:0000313|Proteomes:UP000001023};
RN   [1] {ECO:0000313|EMBL:AAV93384.1, ECO:0000313|Proteomes:UP000001023}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 700808 / DSM 15171 / DSS-3
RC   {ECO:0000313|Proteomes:UP000001023};
RX   PubMed=15602564; DOI=10.1038/nature03170;
RA   Moran M.A., Buchan A., Gonzalez J.M., Heidelberg J.F., Whitman W.B.,
RA   Kiene R.P., Henriksen J.R., King G.M., Belas R., Fuqua C., Brinkac L.,
RA   Lewis M., Johri S., Weaver B., Pai G., Eisen J.A., Rahe E.,
RA   Sheldon W.M., Ye W., Miller T.R., Carlton J., Rasko D.A.,
RA   Paulsen I.T., Ren Q., Daugherty S.C., Deboy R.T., Dodson R.J.,
RA   Durkin A.S., Madupu R., Nelson W.C., Sullivan S.A., Rosovitz M.J.,
RA   Haft D.H., Selengut J., Ward N.;
RT   "Genome sequence of Silicibacter pomeroyi reveals adaptations to the
RT   marine environment.";
RL   Nature 432:910-913(2004).
RN   [2] {ECO:0000313|EMBL:AAV93384.1, ECO:0000313|Proteomes:UP000001023}
RP   GENOME REANNOTATION.
RC   STRAIN=ATCC 700808 / DSM 15171 / DSS-3
RC   {ECO:0000313|Proteomes:UP000001023};
RX   PubMed=25780504; DOI=10.1186/1944-3277-9-11;
RA   Rivers A.R., Smith C.B., Moran M.A.;
RT   "An updated genome annotation for the model marine bacterium Ruegeria
RT   pomeroyi DSS-3.";
RL   Stand. Genomic Sci. 9:11-11(2014).
CC   -!- SUBCELLULAR LOCATION: Cell membrane
CC       {ECO:0000256|RuleBase:RU363032}; Multi-pass membrane protein
CC       {ECO:0000256|RuleBase:RU363032}.
CC   -!- SIMILARITY: Belongs to the binding-protein-dependent transport
CC       system permease family. {ECO:0000256|RuleBase:RU363032}.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; CP000031; AAV93384.1; -; Genomic_DNA.
DR   STRING; 246200.SPO0053; -.
DR   EnsemblBacteria; AAV93384; AAV93384; SPO0053.
DR   KEGG; sil:SPO0053; -.
DR   eggNOG; ENOG4105Y36; Bacteria.
DR   eggNOG; COG0600; LUCA.
DR   HOGENOM; HOG000134234; -.
DR   KO; K15599; -.
DR   OMA; MIANAQI; -.
DR   BioCyc; RPOM246200:G1G48-54-MONOMER; -.
DR   Proteomes; UP000001023; Chromosome.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0055085; P:transmembrane transport; IEA:InterPro.
DR   CDD; cd06261; TM_PBP2; 1.
DR   Gene3D; 1.10.3720.10; -; 1.
DR   InterPro; IPR000515; MetI-like.
DR   InterPro; IPR035906; MetI-like_sf.
DR   Pfam; PF00528; BPD_transp_1; 1.
DR   SUPFAM; SSF161098; SSF161098; 1.
DR   PROSITE; PS50928; ABC_TM1; 1.
PE   3: Inferred from homology;
DR   PRODOM; Q5LWK4.
DR   SWISS-2DPAGE; Q5LWK4.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001023};
KW   Membrane {ECO:0000256|RuleBase:RU363032,
KW   ECO:0000256|SAAS:SAAS00819239};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001023};
KW   Transmembrane {ECO:0000256|RuleBase:RU363032,
KW   ECO:0000256|SAAS:SAAS00819262};
KW   Transmembrane helix {ECO:0000256|RuleBase:RU363032,
KW   ECO:0000256|SAAS:SAAS00819286};
KW   Transport {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM     21     39       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM     74     93       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM    105    127       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM    133    152       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM    188    208       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM    228    247       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   DOMAIN       63    247       ABC transmembrane type-1.
FT                                {ECO:0000259|PROSITE:PS50928}.
SQ   SEQUENCE   258 AA;  27599 MW;  9DEAA2606CF04AAB CRC64;
     MSGRAAQDAA GGCAMTRWLP AVAATLFALA IWQAVVSLTD LPRFILPGPV LVAETWWQSR
     WLIAEHTAVT ALEVLIGLAC GAVLGVATAL QLASSRIARV LVQPMLVFTQ ALPVFALAPI
     LTLWLGYGLW SKVAMAVLII YFPITAAFFD GLMRTPVGYL DLARTMQASP RAVLWHIRVP
     AALPQLASGL RLAAVYAPIG AVIGEWVGAS KGLGYLMLLA NGRAKTDLMF AAMLTLGVLS
     VLLHLAMRRA TRRMAGER
//

If you have problems or comments...

PBIL Back to PBIL home page