(data stored in SCRATCH zone)

SWISSPROT: Q5LWP7_RUEPO

ID   Q5LWP7_RUEPO            Unreviewed;       315 AA.
AC   Q5LWP7;
DT   01-FEB-2005, integrated into UniProtKB/TrEMBL.
DT   01-FEB-2005, sequence version 1.
DT   08-MAY-2019, entry version 85.
DE   SubName: Full=Peptide/opine/nickel uptake family ABC transporter, permease protein {ECO:0000313|EMBL:AAV93431.1};
GN   OrderedLocusNames=SPO0100 {ECO:0000313|EMBL:AAV93431.1};
OS   Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3)
OS   (Silicibacter pomeroyi).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
OC   Rhodobacteraceae; Ruegeria.
OX   NCBI_TaxID=246200 {ECO:0000313|EMBL:AAV93431.1, ECO:0000313|Proteomes:UP000001023};
RN   [1] {ECO:0000313|EMBL:AAV93431.1, ECO:0000313|Proteomes:UP000001023}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 700808 / DSM 15171 / DSS-3
RC   {ECO:0000313|Proteomes:UP000001023};
RX   PubMed=15602564; DOI=10.1038/nature03170;
RA   Moran M.A., Buchan A., Gonzalez J.M., Heidelberg J.F., Whitman W.B.,
RA   Kiene R.P., Henriksen J.R., King G.M., Belas R., Fuqua C., Brinkac L.,
RA   Lewis M., Johri S., Weaver B., Pai G., Eisen J.A., Rahe E.,
RA   Sheldon W.M., Ye W., Miller T.R., Carlton J., Rasko D.A.,
RA   Paulsen I.T., Ren Q., Daugherty S.C., Deboy R.T., Dodson R.J.,
RA   Durkin A.S., Madupu R., Nelson W.C., Sullivan S.A., Rosovitz M.J.,
RA   Haft D.H., Selengut J., Ward N.;
RT   "Genome sequence of Silicibacter pomeroyi reveals adaptations to the
RT   marine environment.";
RL   Nature 432:910-913(2004).
RN   [2] {ECO:0000313|EMBL:AAV93431.1, ECO:0000313|Proteomes:UP000001023}
RP   GENOME REANNOTATION.
RC   STRAIN=ATCC 700808 / DSM 15171 / DSS-3
RC   {ECO:0000313|Proteomes:UP000001023};
RX   PubMed=25780504; DOI=10.1186/1944-3277-9-11;
RA   Rivers A.R., Smith C.B., Moran M.A.;
RT   "An updated genome annotation for the model marine bacterium Ruegeria
RT   pomeroyi DSS-3.";
RL   Stand. Genomic Sci. 9:11-11(2014).
CC   -!- SUBCELLULAR LOCATION: Cell membrane
CC       {ECO:0000256|RuleBase:RU363032}; Multi-pass membrane protein
CC       {ECO:0000256|RuleBase:RU363032}.
CC   -!- SIMILARITY: Belongs to the binding-protein-dependent transport
CC       system permease family. {ECO:0000256|RuleBase:RU363032}.
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DR   EMBL; CP000031; AAV93431.1; -; Genomic_DNA.
DR   RefSeq; WP_011045873.1; NC_003911.12.
DR   STRING; 246200.SPO0100; -.
DR   EnsemblBacteria; AAV93431; AAV93431; SPO0100.
DR   KEGG; sil:SPO0100; -.
DR   eggNOG; ENOG4105CJM; Bacteria.
DR   eggNOG; COG0601; LUCA.
DR   HOGENOM; HOG000170251; -.
DR   KO; K02033; -.
DR   OMA; QFTFLVA; -.
DR   OrthoDB; 1479518at2; -.
DR   BioCyc; RPOM246200:G1G48-101-MONOMER; -.
DR   Proteomes; UP000001023; Chromosome.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0055085; P:transmembrane transport; IEA:InterPro.
DR   CDD; cd06261; TM_PBP2; 1.
DR   Gene3D; 1.10.3720.10; -; 1.
DR   InterPro; IPR000515; MetI-like.
DR   InterPro; IPR035906; MetI-like_sf.
DR   Pfam; PF00528; BPD_transp_1; 1.
DR   SUPFAM; SSF161098; SSF161098; 1.
DR   PROSITE; PS50928; ABC_TM1; 1.
PE   3: Inferred from homology;
DR   PRODOM; Q5LWP7.
DR   SWISS-2DPAGE; Q5LWP7.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001023};
KW   Membrane {ECO:0000256|RuleBase:RU363032,
KW   ECO:0000256|SAAS:SAAS00819239};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001023};
KW   Transmembrane {ECO:0000256|RuleBase:RU363032,
KW   ECO:0000256|SAAS:SAAS00819262};
KW   Transmembrane helix {ECO:0000256|RuleBase:RU363032,
KW   ECO:0000256|SAAS:SAAS00819286};
KW   Transport {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM    101    122       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM    134    157       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM    177    197       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM    235    257       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM    285    307       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   DOMAIN       95    300       ABC transmembrane type-1.
FT                                {ECO:0000259|PROSITE:PS50928}.
SQ   SEQUENCE   315 AA;  34141 MW;  E123BA6526AE4CF1 CRC64;
     MLRYSLKRAL SLAISLAVAS LVIFAVIEIA PGDPASFMLG VNAQPDTLAA LRTELGLDQS
     KAERYVSWVT GMLRGDFGTS YTYRTPVSQM IADRLWVSLP LALYALALST AIALPAGIYA
     AARRGKPGDL AVMGATQLGV AVPNFWFAMM LVLIFAINLR WFNAGGFAGW DKGLTAGLHS
     LTLPAIALAL PQAAILARVM RSALLDILGE DFMRTARAKG LTRRQALWRH GLRNALIPVL
     TIIGLQFSFL LAGSIIIEQV FYLPGLGRLV FQAISARDLI VVESVVMLLV FAVIVVNFLV
     DLAYALVDPR LRTRT
//

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