(data stored in SCRATCH zone)

SWISSPROT: Q5LWS3_RUEPO

ID   Q5LWS3_RUEPO            Unreviewed;       139 AA.
AC   Q5LWS3;
DT   01-FEB-2005, integrated into UniProtKB/TrEMBL.
DT   01-FEB-2005, sequence version 1.
DT   08-MAY-2019, entry version 62.
DE   SubName: Full=Peptidyl-tRNA hydrolase domain protein {ECO:0000313|EMBL:AAV93455.1};
GN   OrderedLocusNames=SPO0127 {ECO:0000313|EMBL:AAV93455.1};
OS   Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3)
OS   (Silicibacter pomeroyi).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
OC   Rhodobacteraceae; Ruegeria.
OX   NCBI_TaxID=246200 {ECO:0000313|EMBL:AAV93455.1, ECO:0000313|Proteomes:UP000001023};
RN   [1] {ECO:0000313|EMBL:AAV93455.1, ECO:0000313|Proteomes:UP000001023}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 700808 / DSM 15171 / DSS-3
RC   {ECO:0000313|Proteomes:UP000001023};
RX   PubMed=15602564; DOI=10.1038/nature03170;
RA   Moran M.A., Buchan A., Gonzalez J.M., Heidelberg J.F., Whitman W.B.,
RA   Kiene R.P., Henriksen J.R., King G.M., Belas R., Fuqua C., Brinkac L.,
RA   Lewis M., Johri S., Weaver B., Pai G., Eisen J.A., Rahe E.,
RA   Sheldon W.M., Ye W., Miller T.R., Carlton J., Rasko D.A.,
RA   Paulsen I.T., Ren Q., Daugherty S.C., Deboy R.T., Dodson R.J.,
RA   Durkin A.S., Madupu R., Nelson W.C., Sullivan S.A., Rosovitz M.J.,
RA   Haft D.H., Selengut J., Ward N.;
RT   "Genome sequence of Silicibacter pomeroyi reveals adaptations to the
RT   marine environment.";
RL   Nature 432:910-913(2004).
RN   [2] {ECO:0000313|EMBL:AAV93455.1, ECO:0000313|Proteomes:UP000001023}
RP   GENOME REANNOTATION.
RC   STRAIN=ATCC 700808 / DSM 15171 / DSS-3
RC   {ECO:0000313|Proteomes:UP000001023};
RX   PubMed=25780504; DOI=10.1186/1944-3277-9-11;
RA   Rivers A.R., Smith C.B., Moran M.A.;
RT   "An updated genome annotation for the model marine bacterium Ruegeria
RT   pomeroyi DSS-3.";
RL   Stand. Genomic Sci. 9:11-11(2014).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; CP000031; AAV93455.1; -; Genomic_DNA.
DR   RefSeq; WP_011045898.1; NC_003911.12.
DR   STRING; 246200.SPO0127; -.
DR   EnsemblBacteria; AAV93455; AAV93455; SPO0127.
DR   KEGG; sil:SPO0127; -.
DR   eggNOG; ENOG4108YZN; Bacteria.
DR   eggNOG; COG1186; LUCA.
DR   HOGENOM; HOG000244440; -.
DR   KO; K15034; -.
DR   OMA; KAQQHRT; -.
DR   OrthoDB; 2047548at2; -.
DR   BioCyc; RPOM246200:G1G48-130-MONOMER; -.
DR   Proteomes; UP000001023; Chromosome.
DR   GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR   GO; GO:0003747; F:translation release factor activity; IEA:InterPro.
DR   InterPro; IPR000352; Pep_chain_release_fac_I_II.
DR   Pfam; PF00472; RF-1; 1.
DR   PROSITE; PS00745; RF_PROK_I; 1.
PE   4: Predicted;
DR   PRODOM; Q5LWS3.
DR   SWISS-2DPAGE; Q5LWS3.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001023};
KW   Hydrolase {ECO:0000313|EMBL:AAV93455.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001023}.
FT   DOMAIN       21     37       RF_PROK_I. {ECO:0000259|PROSITE:PS00745}.
SQ   SEQUENCE   139 AA;  15462 MW;  DD498788FE109210 CRC64;
     MLYVTDDIAI QDWELSESFM RASGPGGQNV NKVSSAVELR FEAARSPSLP APVKARLKRL
     AGRRWTGEGA IVLQCDETRS QARNREIVRA RLVELIARAL VAPKRRIATK PTRGSVRRRL
     DSKKARGEVK ALRGKIGDE
//

If you have problems or comments...

PBIL Back to PBIL home page