(data stored in SCRATCH zone)

SWISSPROT: Q5LWV0_RUEPO

ID   Q5LWV0_RUEPO            Unreviewed;       195 AA.
AC   Q5LWV0;
DT   01-FEB-2005, integrated into UniProtKB/TrEMBL.
DT   01-FEB-2005, sequence version 1.
DT   08-MAY-2019, entry version 92.
DE   SubName: Full=Transcriptional regulator, TetR family {ECO:0000313|EMBL:AAV93481.1};
GN   OrderedLocusNames=SPO0153 {ECO:0000313|EMBL:AAV93481.1};
OS   Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3)
OS   (Silicibacter pomeroyi).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
OC   Rhodobacteraceae; Ruegeria.
OX   NCBI_TaxID=246200 {ECO:0000313|EMBL:AAV93481.1, ECO:0000313|Proteomes:UP000001023};
RN   [1] {ECO:0000313|EMBL:AAV93481.1, ECO:0000313|Proteomes:UP000001023}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 700808 / DSM 15171 / DSS-3
RC   {ECO:0000313|Proteomes:UP000001023};
RX   PubMed=15602564; DOI=10.1038/nature03170;
RA   Moran M.A., Buchan A., Gonzalez J.M., Heidelberg J.F., Whitman W.B.,
RA   Kiene R.P., Henriksen J.R., King G.M., Belas R., Fuqua C., Brinkac L.,
RA   Lewis M., Johri S., Weaver B., Pai G., Eisen J.A., Rahe E.,
RA   Sheldon W.M., Ye W., Miller T.R., Carlton J., Rasko D.A.,
RA   Paulsen I.T., Ren Q., Daugherty S.C., Deboy R.T., Dodson R.J.,
RA   Durkin A.S., Madupu R., Nelson W.C., Sullivan S.A., Rosovitz M.J.,
RA   Haft D.H., Selengut J., Ward N.;
RT   "Genome sequence of Silicibacter pomeroyi reveals adaptations to the
RT   marine environment.";
RL   Nature 432:910-913(2004).
RN   [2] {ECO:0000313|EMBL:AAV93481.1, ECO:0000313|Proteomes:UP000001023}
RP   GENOME REANNOTATION.
RC   STRAIN=ATCC 700808 / DSM 15171 / DSS-3
RC   {ECO:0000313|Proteomes:UP000001023};
RX   PubMed=25780504; DOI=10.1186/1944-3277-9-11;
RA   Rivers A.R., Smith C.B., Moran M.A.;
RT   "An updated genome annotation for the model marine bacterium Ruegeria
RT   pomeroyi DSS-3.";
RL   Stand. Genomic Sci. 9:11-11(2014).
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DR   EMBL; CP000031; AAV93481.1; -; Genomic_DNA.
DR   RefSeq; WP_011045924.1; NC_003911.12.
DR   STRING; 246200.SPO0153; -.
DR   EnsemblBacteria; AAV93481; AAV93481; SPO0153.
DR   KEGG; sil:SPO0153; -.
DR   eggNOG; ENOG4105IH2; Bacteria.
DR   eggNOG; ENOG4111TFD; LUCA.
DR   HOGENOM; HOG000123777; -.
DR   OMA; TKETHAR; -.
DR   OrthoDB; 1437290at2; -.
DR   BioCyc; RPOM246200:G1G48-157-MONOMER; -.
DR   Proteomes; UP000001023; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR001647; HTH_TetR.
DR   InterPro; IPR036271; Tet_transcr_reg_TetR-rel_C_sf.
DR   Pfam; PF00440; TetR_N; 1.
DR   PRINTS; PR00455; HTHTETR.
DR   SUPFAM; SSF46689; SSF46689; 1.
DR   SUPFAM; SSF48498; SSF48498; 1.
DR   PROSITE; PS50977; HTH_TETR_2; 1.
PE   4: Predicted;
DR   PRODOM; Q5LWV0.
DR   SWISS-2DPAGE; Q5LWV0.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001023};
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00335,
KW   ECO:0000256|SAAS:SAAS00132209};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001023};
KW   Transcription {ECO:0000256|SAAS:SAAS00131596};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS00132066}.
FT   DOMAIN       10     70       HTH tetR-type. {ECO:0000259|PROSITE:
FT                                PS50977}.
FT   DNA_BIND     33     52       H-T-H motif. {ECO:0000256|PROSITE-
FT                                ProRule:PRU00335}.
SQ   SEQUENCE   195 AA;  21055 MW;  7258A907C2DC2924 CRC64;
     MTRPPQKRRL ETRARLLAEA ARLVEAQGYA GLRVEDVVEA AGVAKGTLFS HFTDKDGLLA
     VLIGAEVMRL IDGMETAGPP DDLPQLMHRL APLLDFIASD RVIFDLLLRY SGSTGAERNE
     VVADGFYRQI DLWAGWIAGM QAAGTVRGDH PPALLAEGIQ AFLNQIIAIR FCQGGQATGT
     PAGALYPFLA AWLIT
//

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