(data stored in SCRATCH zone)

SWISSPROT: Q5LX04_RUEPO

ID   Q5LX04_RUEPO            Unreviewed;       450 AA.
AC   Q5LX04;
DT   01-FEB-2005, integrated into UniProtKB/TrEMBL.
DT   01-FEB-2005, sequence version 1.
DT   08-MAY-2019, entry version 70.
DE   SubName: Full=Mechanosensitive ion channel family protein {ECO:0000313|EMBL:AAV93543.1};
GN   OrderedLocusNames=SPO0218 {ECO:0000313|EMBL:AAV93543.1};
OS   Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3)
OS   (Silicibacter pomeroyi).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
OC   Rhodobacteraceae; Ruegeria.
OX   NCBI_TaxID=246200 {ECO:0000313|EMBL:AAV93543.1, ECO:0000313|Proteomes:UP000001023};
RN   [1] {ECO:0000313|EMBL:AAV93543.1, ECO:0000313|Proteomes:UP000001023}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 700808 / DSM 15171 / DSS-3
RC   {ECO:0000313|Proteomes:UP000001023};
RX   PubMed=15602564; DOI=10.1038/nature03170;
RA   Moran M.A., Buchan A., Gonzalez J.M., Heidelberg J.F., Whitman W.B.,
RA   Kiene R.P., Henriksen J.R., King G.M., Belas R., Fuqua C., Brinkac L.,
RA   Lewis M., Johri S., Weaver B., Pai G., Eisen J.A., Rahe E.,
RA   Sheldon W.M., Ye W., Miller T.R., Carlton J., Rasko D.A.,
RA   Paulsen I.T., Ren Q., Daugherty S.C., Deboy R.T., Dodson R.J.,
RA   Durkin A.S., Madupu R., Nelson W.C., Sullivan S.A., Rosovitz M.J.,
RA   Haft D.H., Selengut J., Ward N.;
RT   "Genome sequence of Silicibacter pomeroyi reveals adaptations to the
RT   marine environment.";
RL   Nature 432:910-913(2004).
RN   [2] {ECO:0000313|EMBL:AAV93543.1, ECO:0000313|Proteomes:UP000001023}
RP   GENOME REANNOTATION.
RC   STRAIN=ATCC 700808 / DSM 15171 / DSS-3
RC   {ECO:0000313|Proteomes:UP000001023};
RX   PubMed=25780504; DOI=10.1186/1944-3277-9-11;
RA   Rivers A.R., Smith C.B., Moran M.A.;
RT   "An updated genome annotation for the model marine bacterium Ruegeria
RT   pomeroyi DSS-3.";
RL   Stand. Genomic Sci. 9:11-11(2014).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; CP000031; AAV93543.1; -; Genomic_DNA.
DR   RefSeq; WP_011045986.1; NC_003911.12.
DR   STRING; 246200.SPO0218; -.
DR   EnsemblBacteria; AAV93543; AAV93543; SPO0218.
DR   KEGG; sil:SPO0218; -.
DR   eggNOG; ENOG4105EGS; Bacteria.
DR   eggNOG; COG3264; LUCA.
DR   HOGENOM; HOG000251959; -.
DR   OMA; FWSKVAF; -.
DR   OrthoDB; 1903165at2; -.
DR   BioCyc; RPOM246200:G1G48-222-MONOMER; -.
DR   Proteomes; UP000001023; Chromosome.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0055085; P:transmembrane transport; IEA:InterPro.
DR   Gene3D; 2.30.30.60; -; 1.
DR   InterPro; IPR010920; LSM_dom_sf.
DR   InterPro; IPR011066; MscC_channel_C.
DR   InterPro; IPR006685; MscS_channel.
DR   InterPro; IPR011014; MscS_channel_TM-2.
DR   InterPro; IPR023408; MscS_dom_sf.
DR   Pfam; PF00924; MS_channel; 1.
DR   SUPFAM; SSF50182; SSF50182; 1.
DR   SUPFAM; SSF82689; SSF82689; 1.
DR   SUPFAM; SSF82861; SSF82861; 1.
PE   4: Predicted;
DR   PRODOM; Q5LX04.
DR   SWISS-2DPAGE; Q5LX04.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001023};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001023};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     36     55       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     76     98       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    110    132       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    139    156       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    176    198       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    219    241       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    247    276       Helical. {ECO:0000256|SAM:Phobius}.
SQ   SEQUENCE   450 AA;  49412 MW;  3C948674A39DB4EC CRC64;
     MSEDILPATL DELIATLLTE GHRLVGLFLT PGWRQYQLLI IVLLIGAALL LSLLTRTHWE
     AWARSRAGWP KWRLRTLVLL MRRLSLLYFV VLSWMTYLVM QQMTWPSRSY VIGVVATLAT
     ALLVIALVAR AVRNRTIRLV FRWSMWVYAT LVALNLTDDV ARFLDGISIE IGALHISVLG
     VMKAVLLVGA LLVLVRLASQ GASNALARND DISPSMQVLL AKAVQVLLYG WVFIVAIRTL
     GFDLTGLAFL SGAIGVGIGF GLQKVVSNLI SGIIILMDRS IKPGDVISLG ETFGWINALG
     ARYVSVVTRD GREYLIPNED LITSQVVNWS HSDQYVRLDL NFGTSYGDDP HKVRAVSIAA
     ARSVGRVLSG SGRDPVCHIV GFGDSSVDYV LRFWITDPTA GLTNIRGNVF LALWDAFQAE
     GISIPFPQRE VRMLENEGGL PQFAGQGGAD
//

If you have problems or comments...

PBIL Back to PBIL home page