(data stored in SCRATCH zone)

SWISSPROT: Q5LX34_RUEPO

ID   Q5LX34_RUEPO            Unreviewed;       145 AA.
AC   Q5LX34;
DT   01-FEB-2005, integrated into UniProtKB/TrEMBL.
DT   01-FEB-2005, sequence version 1.
DT   08-MAY-2019, entry version 90.
DE   SubName: Full=Transcriptional regulator, MarR family {ECO:0000313|EMBL:AAV93575.1};
GN   OrderedLocusNames=SPO0255 {ECO:0000313|EMBL:AAV93575.1};
OS   Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3)
OS   (Silicibacter pomeroyi).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
OC   Rhodobacteraceae; Ruegeria.
OX   NCBI_TaxID=246200 {ECO:0000313|EMBL:AAV93575.1, ECO:0000313|Proteomes:UP000001023};
RN   [1] {ECO:0000313|EMBL:AAV93575.1, ECO:0000313|Proteomes:UP000001023}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 700808 / DSM 15171 / DSS-3
RC   {ECO:0000313|Proteomes:UP000001023};
RX   PubMed=15602564; DOI=10.1038/nature03170;
RA   Moran M.A., Buchan A., Gonzalez J.M., Heidelberg J.F., Whitman W.B.,
RA   Kiene R.P., Henriksen J.R., King G.M., Belas R., Fuqua C., Brinkac L.,
RA   Lewis M., Johri S., Weaver B., Pai G., Eisen J.A., Rahe E.,
RA   Sheldon W.M., Ye W., Miller T.R., Carlton J., Rasko D.A.,
RA   Paulsen I.T., Ren Q., Daugherty S.C., Deboy R.T., Dodson R.J.,
RA   Durkin A.S., Madupu R., Nelson W.C., Sullivan S.A., Rosovitz M.J.,
RA   Haft D.H., Selengut J., Ward N.;
RT   "Genome sequence of Silicibacter pomeroyi reveals adaptations to the
RT   marine environment.";
RL   Nature 432:910-913(2004).
RN   [2] {ECO:0000313|EMBL:AAV93575.1, ECO:0000313|Proteomes:UP000001023}
RP   GENOME REANNOTATION.
RC   STRAIN=ATCC 700808 / DSM 15171 / DSS-3
RC   {ECO:0000313|Proteomes:UP000001023};
RX   PubMed=25780504; DOI=10.1186/1944-3277-9-11;
RA   Rivers A.R., Smith C.B., Moran M.A.;
RT   "An updated genome annotation for the model marine bacterium Ruegeria
RT   pomeroyi DSS-3.";
RL   Stand. Genomic Sci. 9:11-11(2014).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; CP000031; AAV93575.1; -; Genomic_DNA.
DR   RefSeq; WP_011046017.1; NC_003911.12.
DR   STRING; 246200.SPO0255; -.
DR   EnsemblBacteria; AAV93575; AAV93575; SPO0255.
DR   KEGG; sil:SPO0255; -.
DR   eggNOG; ENOG4105K56; Bacteria.
DR   eggNOG; ENOG4111TPH; LUCA.
DR   HOGENOM; HOG000221448; -.
DR   OMA; EAYELTF; -.
DR   OrthoDB; 1626703at2; -.
DR   BioCyc; RPOM246200:G1G48-260-MONOMER; -.
DR   Proteomes; UP000001023; Chromosome.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR000835; HTH_MarR-typ.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   Pfam; PF01047; MarR; 1.
DR   SMART; SM00347; HTH_MARR; 1.
DR   SUPFAM; SSF46785; SSF46785; 1.
DR   PROSITE; PS50995; HTH_MARR_2; 1.
PE   4: Predicted;
DR   PRODOM; Q5LX34.
DR   SWISS-2DPAGE; Q5LX34.
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000001023};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001023}.
FT   DOMAIN        9    139       HTH marR-type. {ECO:0000259|PROSITE:
FT                                PS50995}.
FT   COILED      120    140       {ECO:0000256|SAM:Coils}.
SQ   SEQUENCE   145 AA;  16218 MW;  BF25961393092FF2 CRC64;
     MLDRALTLDE LLCFSLYSAN HAMGRLYRPL LARFDLTYPQ YLVLVALWQR DGRKVSALGA
     ELQLESNTLT PLLKRMEAAG LIRRARNPED ERSVIVTLTD KGRGLEGEAA EISNCILAAA
     DADIAELAEL RDRLHRLTAR LREAG
//

If you have problems or comments...

PBIL Back to PBIL home page