(data stored in SCRATCH zone)

SWISSPROT: Q5LX79_RUEPO

ID   Q5LX79_RUEPO            Unreviewed;       614 AA.
AC   Q5LX79;
DT   01-FEB-2005, integrated into UniProtKB/TrEMBL.
DT   01-FEB-2005, sequence version 1.
DT   08-MAY-2019, entry version 69.
DE   SubName: Full=Glycerophosphoryl diester phosphodiesterase family protein {ECO:0000313|EMBL:AAV93619.1};
GN   OrderedLocusNames=SPO0301 {ECO:0000313|EMBL:AAV93619.1};
OS   Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3)
OS   (Silicibacter pomeroyi).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
OC   Rhodobacteraceae; Ruegeria.
OX   NCBI_TaxID=246200 {ECO:0000313|EMBL:AAV93619.1, ECO:0000313|Proteomes:UP000001023};
RN   [1] {ECO:0000313|EMBL:AAV93619.1, ECO:0000313|Proteomes:UP000001023}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 700808 / DSM 15171 / DSS-3
RC   {ECO:0000313|Proteomes:UP000001023};
RX   PubMed=15602564; DOI=10.1038/nature03170;
RA   Moran M.A., Buchan A., Gonzalez J.M., Heidelberg J.F., Whitman W.B.,
RA   Kiene R.P., Henriksen J.R., King G.M., Belas R., Fuqua C., Brinkac L.,
RA   Lewis M., Johri S., Weaver B., Pai G., Eisen J.A., Rahe E.,
RA   Sheldon W.M., Ye W., Miller T.R., Carlton J., Rasko D.A.,
RA   Paulsen I.T., Ren Q., Daugherty S.C., Deboy R.T., Dodson R.J.,
RA   Durkin A.S., Madupu R., Nelson W.C., Sullivan S.A., Rosovitz M.J.,
RA   Haft D.H., Selengut J., Ward N.;
RT   "Genome sequence of Silicibacter pomeroyi reveals adaptations to the
RT   marine environment.";
RL   Nature 432:910-913(2004).
RN   [2] {ECO:0000313|EMBL:AAV93619.1, ECO:0000313|Proteomes:UP000001023}
RP   GENOME REANNOTATION.
RC   STRAIN=ATCC 700808 / DSM 15171 / DSS-3
RC   {ECO:0000313|Proteomes:UP000001023};
RX   PubMed=25780504; DOI=10.1186/1944-3277-9-11;
RA   Rivers A.R., Smith C.B., Moran M.A.;
RT   "An updated genome annotation for the model marine bacterium Ruegeria
RT   pomeroyi DSS-3.";
RL   Stand. Genomic Sci. 9:11-11(2014).
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DR   EMBL; CP000031; AAV93619.1; -; Genomic_DNA.
DR   RefSeq; WP_011046062.1; NC_003911.12.
DR   STRING; 246200.SPO0301; -.
DR   EnsemblBacteria; AAV93619; AAV93619; SPO0301.
DR   KEGG; sil:SPO0301; -.
DR   eggNOG; ENOG4107T6V; Bacteria.
DR   eggNOG; COG0584; LUCA.
DR   HOGENOM; HOG000014507; -.
DR   KO; K01126; -.
DR   OMA; FITMVLN; -.
DR   OrthoDB; 1542724at2; -.
DR   BioCyc; RPOM246200:G1G48-306-MONOMER; -.
DR   Proteomes; UP000001023; Chromosome.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0008889; F:glycerophosphodiester phosphodiesterase activity; IEA:InterPro.
DR   GO; GO:0006629; P:lipid metabolic process; IEA:InterPro.
DR   Gene3D; 3.20.20.190; -; 1.
DR   InterPro; IPR030395; GP_PDE_dom.
DR   InterPro; IPR017946; PLC-like_Pdiesterase_TIM-brl.
DR   Pfam; PF03009; GDPD; 1.
DR   SUPFAM; SSF51695; SSF51695; 1.
DR   PROSITE; PS51704; GP_PDE; 1.
PE   4: Predicted;
DR   PRODOM; Q5LX79.
DR   SWISS-2DPAGE; Q5LX79.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001023};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001023};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     20     44       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     64     87       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    121    149       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    169    187       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    228    252       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    264    290       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN      350    580       GP-PDE. {ECO:0000259|PROSITE:PS51704}.
SQ   SEQUENCE   614 AA;  65858 MW;  A808DA1780FFEBFF CRC64;
     MSHFTHVRNA WSGSWSRRRV FVPLYAALRL LVLALIAPAL AGLINLAVSL SDQSALTDQD
     IARFVLSPLG FAATLAVLSV LLVAEVLSFA VMAATLRSGA SNVWHAGSAG LALVLRRLRP
     LLIFAALFVL RVLALAAPFV ALAGLIAWWV LVDYDINYYL TFRPPSFRLA MAGIAVLVLV
     LAWLLMLRLS GWALSLHLVI FEGTRPAQAF AESTRRMGTR RGALKIELVL WLLTRLALAA
     ALGALASAAL ALVPIPQEGA LRRALVLVVL VMGLWSLAGL ALAATALGAL TKLLDRFYDG
     AAAAAPLSPS RPQGLRGRLI GAALLAALAL GAGMWVSDGL LTQLTAKDEV SVIGHRGAAG
     ARPENTMAAI VKAIEDGADW VEIDVQETAD GEVVVMHDSD FMKLAGVPTK IWDATMQDLA
     EIDIGSWFSP DYAAERAPTL RAVLEAARGK SNVLIELKYY GHDVDLENRV IALVEEFGMQ
     DQIATMSLKY PAVQKMRALR PDWRTGVLAA TAVGDLAGLE GDFVAVSSAS LRPSLLRAAH
     AAGKDVYVWT VNEPLLMSKM ISMGVDGLIT DEPAMAREVL AVRATLNPAE RLLLWLTQEL
     GWELNAKAYR DDSP
//

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