(data stored in SCRATCH zone)

SWISSPROT: Q5LX99_RUEPO

ID   Q5LX99_RUEPO            Unreviewed;       611 AA.
AC   Q5LX99;
DT   01-FEB-2005, integrated into UniProtKB/TrEMBL.
DT   01-FEB-2005, sequence version 1.
DT   08-MAY-2019, entry version 84.
DE   SubName: Full=TPR domain protein {ECO:0000313|EMBL:AAV93635.1};
GN   OrderedLocusNames=SPO0317 {ECO:0000313|EMBL:AAV93635.1};
OS   Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3)
OS   (Silicibacter pomeroyi).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
OC   Rhodobacteraceae; Ruegeria.
OX   NCBI_TaxID=246200 {ECO:0000313|EMBL:AAV93635.1, ECO:0000313|Proteomes:UP000001023};
RN   [1] {ECO:0000313|EMBL:AAV93635.1, ECO:0000313|Proteomes:UP000001023}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 700808 / DSM 15171 / DSS-3
RC   {ECO:0000313|Proteomes:UP000001023};
RX   PubMed=15602564; DOI=10.1038/nature03170;
RA   Moran M.A., Buchan A., Gonzalez J.M., Heidelberg J.F., Whitman W.B.,
RA   Kiene R.P., Henriksen J.R., King G.M., Belas R., Fuqua C., Brinkac L.,
RA   Lewis M., Johri S., Weaver B., Pai G., Eisen J.A., Rahe E.,
RA   Sheldon W.M., Ye W., Miller T.R., Carlton J., Rasko D.A.,
RA   Paulsen I.T., Ren Q., Daugherty S.C., Deboy R.T., Dodson R.J.,
RA   Durkin A.S., Madupu R., Nelson W.C., Sullivan S.A., Rosovitz M.J.,
RA   Haft D.H., Selengut J., Ward N.;
RT   "Genome sequence of Silicibacter pomeroyi reveals adaptations to the
RT   marine environment.";
RL   Nature 432:910-913(2004).
RN   [2] {ECO:0000313|EMBL:AAV93635.1, ECO:0000313|Proteomes:UP000001023}
RP   GENOME REANNOTATION.
RC   STRAIN=ATCC 700808 / DSM 15171 / DSS-3
RC   {ECO:0000313|Proteomes:UP000001023};
RX   PubMed=25780504; DOI=10.1186/1944-3277-9-11;
RA   Rivers A.R., Smith C.B., Moran M.A.;
RT   "An updated genome annotation for the model marine bacterium Ruegeria
RT   pomeroyi DSS-3.";
RL   Stand. Genomic Sci. 9:11-11(2014).
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DR   EMBL; CP000031; AAV93635.1; -; Genomic_DNA.
DR   STRING; 246200.SPO0317; -.
DR   EnsemblBacteria; AAV93635; AAV93635; SPO0317.
DR   KEGG; sil:SPO0317; -.
DR   eggNOG; ENOG4105DJQ; Bacteria.
DR   eggNOG; COG0457; LUCA.
DR   HOGENOM; HOG000138933; -.
DR   OMA; YLGYSWI; -.
DR   Proteomes; UP000001023; Chromosome.
DR   Gene3D; 1.25.40.10; -; 2.
DR   InterPro; IPR013026; TPR-contain_dom.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   InterPro; IPR013105; TPR_2.
DR   InterPro; IPR019734; TPR_repeat.
DR   Pfam; PF07719; TPR_2; 1.
DR   Pfam; PF13174; TPR_6; 1.
DR   SMART; SM00028; TPR; 7.
DR   SUPFAM; SSF48452; SSF48452; 2.
DR   PROSITE; PS50005; TPR; 7.
DR   PROSITE; PS50293; TPR_REGION; 2.
PE   4: Predicted;
DR   PRODOM; Q5LX99.
DR   SWISS-2DPAGE; Q5LX99.
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000001023};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001023};
KW   TPR repeat {ECO:0000256|PROSITE-ProRule:PRU00339}.
FT   REPEAT       68    101       TPR. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00339}.
FT   DOMAIN       82    101       TPR_REGION. {ECO:0000259|PROSITE:
FT                                PS50293}.
FT   DOMAIN      298    574       TPR_REGION. {ECO:0000259|PROSITE:
FT                                PS50293}.
FT   REPEAT      298    331       TPR. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00339}.
FT   REPEAT      332    365       TPR. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00339}.
FT   REPEAT      400    433       TPR. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00339}.
FT   REPEAT      438    471       TPR. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00339}.
FT   REPEAT      473    506       TPR. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00339}.
FT   REPEAT      507    540       TPR. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00339}.
FT   COILED      482    502       {ECO:0000256|SAM:Coils}.
SQ   SEQUENCE   611 AA;  66238 MW;  9DB20E96195F976C CRC64;
     MFSFVQMTGC LLPLTALTPL SHCTRPRNAL ALLQSSWKGG SLAISLVRNA VAAVLAAALS
     VPVSADVGAG SYLAARQAVF ANDFSSAADY FARALAIDPQ NPALMENMVL SQLALGRLEQ
     AYPVAQLMQE AGLQSQVANI AIVVHLLSEE RYQEVLDRDP EMRGVGKLVD GLVAGWAEMG
     LGSVARALAQ FDKVADEAGL RGFANYHKAM ALASVGDFEG AEALFAADDG ALTTISRRAA
     LARAEILSQL DRNDQALEML ADVFSGGFDP ALSDIADRLV AGETLPFSLV RSVRDGLAEV
     FFTIGAALNG EASDDFTLVY IRSAVHLRPD HIDALLMTAG LLESLGQYDL AVATYKQIPN
     DSPDYHAAEL GRAEALRRSA KPDAAIEVLE KLAKDYPSQP QAFVALGDLQ RQQEAYDRAA
     TAYDKALQLT DPGAPNMWFL HYARGICHER LGNWPGAEAD FRAALELNPD QPQVLNYLGY
     SLVEKQEKLD EALDLIERAV AARPDSGYIV DSLGWVLFRL GRYDEAVGHM ERAVELMPVD
     PVVNDHLGDV LWAVGRVREA EFQWRRALSF IKADDTDGEA DPERIRRKLE IGLDRVLAEE
     GVPPLKVANG D
//

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