(data stored in SCRATCH zone)

SWISSPROT: Q5LXB0_RUEPO

ID   Q5LXB0_RUEPO            Unreviewed;       315 AA.
AC   Q5LXB0;
DT   01-FEB-2005, integrated into UniProtKB/TrEMBL.
DT   01-FEB-2005, sequence version 1.
DT   08-MAY-2019, entry version 86.
DE   SubName: Full=Transcriptional regulator, LysR family {ECO:0000313|EMBL:AAV93642.1};
GN   OrderedLocusNames=SPO0324 {ECO:0000313|EMBL:AAV93642.1};
OS   Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3)
OS   (Silicibacter pomeroyi).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
OC   Rhodobacteraceae; Ruegeria.
OX   NCBI_TaxID=246200 {ECO:0000313|EMBL:AAV93642.1, ECO:0000313|Proteomes:UP000001023};
RN   [1] {ECO:0000313|EMBL:AAV93642.1, ECO:0000313|Proteomes:UP000001023}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 700808 / DSM 15171 / DSS-3
RC   {ECO:0000313|Proteomes:UP000001023};
RX   PubMed=15602564; DOI=10.1038/nature03170;
RA   Moran M.A., Buchan A., Gonzalez J.M., Heidelberg J.F., Whitman W.B.,
RA   Kiene R.P., Henriksen J.R., King G.M., Belas R., Fuqua C., Brinkac L.,
RA   Lewis M., Johri S., Weaver B., Pai G., Eisen J.A., Rahe E.,
RA   Sheldon W.M., Ye W., Miller T.R., Carlton J., Rasko D.A.,
RA   Paulsen I.T., Ren Q., Daugherty S.C., Deboy R.T., Dodson R.J.,
RA   Durkin A.S., Madupu R., Nelson W.C., Sullivan S.A., Rosovitz M.J.,
RA   Haft D.H., Selengut J., Ward N.;
RT   "Genome sequence of Silicibacter pomeroyi reveals adaptations to the
RT   marine environment.";
RL   Nature 432:910-913(2004).
RN   [2] {ECO:0000313|EMBL:AAV93642.1, ECO:0000313|Proteomes:UP000001023}
RP   GENOME REANNOTATION.
RC   STRAIN=ATCC 700808 / DSM 15171 / DSS-3
RC   {ECO:0000313|Proteomes:UP000001023};
RX   PubMed=25780504; DOI=10.1186/1944-3277-9-11;
RA   Rivers A.R., Smith C.B., Moran M.A.;
RT   "An updated genome annotation for the model marine bacterium Ruegeria
RT   pomeroyi DSS-3.";
RL   Stand. Genomic Sci. 9:11-11(2014).
CC   -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC       {ECO:0000256|SAAS:SAAS01096700}.
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DR   EMBL; CP000031; AAV93642.1; -; Genomic_DNA.
DR   RefSeq; WP_011046085.1; NC_003911.12.
DR   STRING; 246200.SPO0324; -.
DR   EnsemblBacteria; AAV93642; AAV93642; SPO0324.
DR   KEGG; sil:SPO0324; -.
DR   eggNOG; ENOG4105ETT; Bacteria.
DR   eggNOG; ENOG410XS6G; LUCA.
DR   HOGENOM; HOG000233528; -.
DR   KO; K03566; -.
DR   OMA; WEPWFQA; -.
DR   OrthoDB; 846433at2; -.
DR   BioCyc; RPOM246200:G1G48-331-MONOMER; -.
DR   Proteomes; UP000001023; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR005119; LysR_subst-bd.
DR   InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   Pfam; PF00126; HTH_1; 1.
DR   Pfam; PF03466; LysR_substrate; 1.
DR   PRINTS; PR00039; HTHLYSR.
DR   SUPFAM; SSF46785; SSF46785; 1.
DR   PROSITE; PS50931; HTH_LYSR; 1.
PE   3: Inferred from homology;
DR   PRODOM; Q5LXB0.
DR   SWISS-2DPAGE; Q5LXB0.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001023};
KW   DNA-binding {ECO:0000256|SAAS:SAAS01096662};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001023};
KW   Transcription {ECO:0000256|SAAS:SAAS01096725};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS01096646}.
FT   DOMAIN        6     63       HTH lysR-type. {ECO:0000259|PROSITE:
FT                                PS50931}.
SQ   SEQUENCE   315 AA;  34768 MW;  4E516A32D41E18BE CRC64;
     MSDRLPPLTA LRAFDAAARH MSFAKAAAEL NVTPAALSFQ IKSLEEHLGR PLFRRLNRAV
     ELTEEGRALA PGAQEGFEVL TAAWRAARRL QDNTTLTVTA GPALTAKWLA PRLYDFARAH
     PEIDLRISTS LRLVDLARDE VDVAIRFGQG SDAGLYSVSA RKEWMIPVMT PELANRFPTP
     ESLRDAPLIF DESISFLDPP VDWPTWFRAV GIDFTPQRGA HFSNADHAID AAVAGVGVVL
     GRRPMIIKDV IEGRLVMPFK TAVETDARFR FVCLAGAETQ PKIAAFRDWF LAEIAKTAHI
     SDGLTIVHVR DIPPK
//

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