(data stored in SCRATCH zone)

SWISSPROT: Q6BMC8_DEBHA

ID   Q6BMC8_DEBHA            Unreviewed;       111 AA.
AC   Q6BMC8;
DT   16-AUG-2004, integrated into UniProtKB/TrEMBL.
DT   04-NOV-2008, sequence version 2.
DT   10-APR-2019, entry version 95.
DE   RecName: Full=DNA-directed RNA polymerase subunit {ECO:0000256|PIRNR:PIRNR005586};
GN   OrderedLocusNames=DEHA2F06556g {ECO:0000313|EMBL:CAG88975.2};
OS   Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC
OS   0083 / IGC 2968) (Yeast) (Torulaspora hansenii).
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
OC   Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Debaryomyces.
OX   NCBI_TaxID=284592 {ECO:0000313|EMBL:CAG88975.2, ECO:0000313|Proteomes:UP000000599};
RN   [1] {ECO:0000313|EMBL:CAG88975.2, ECO:0000313|Proteomes:UP000000599}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968
RC   {ECO:0000313|Proteomes:UP000000599};
RX   PubMed=15229592; DOI=10.1038/nature02579;
RG   Genolevures;
RA   Dujon B., Sherman D., Fischer G., Durrens P., Casaregola S.,
RA   Lafontaine I., de Montigny J., Marck C., Neuveglise C., Talla E.,
RA   Goffard N., Frangeul L., Aigle M., Anthouard V., Babour A., Barbe V.,
RA   Barnay S., Blanchin S., Beckerich J.M., Beyne E., Bleykasten C.,
RA   Boisrame A., Boyer J., Cattolico L., Confanioleri F., de Daruvar A.,
RA   Despons L., Fabre E., Fairhead C., Ferry-Dumazet H., Groppi A.,
RA   Hantraye F., Hennequin C., Jauniaux N., Joyet P., Kachouri R.,
RA   Kerrest A., Koszul R., Lemaire M., Lesur I., Ma L., Muller H.,
RA   Nicaud J.M., Nikolski M., Oztas S., Ozier-Kalogeropoulos O.,
RA   Pellenz S., Potier S., Richard G.F., Straub M.L., Suleau A.,
RA   Swennene D., Tekaia F., Wesolowski-Louvel M., Westhof E., Wirth B.,
RA   Zeniou-Meyer M., Zivanovic I., Bolotin-Fukuhara M., Thierry A.,
RA   Bouchier C., Caudron B., Scarpelli C., Gaillardin C., Weissenbach J.,
RA   Wincker P., Souciet J.L.;
RT   "Genome evolution in yeasts.";
RL   Nature 430:35-44(2004).
CC   -!- FUNCTION: DNA-dependent RNA polymerase catalyzes the transcription
CC       of DNA into RNA using the four ribonucleoside triphosphates as
CC       substrates. {ECO:0000256|PIRNR:PIRNR005586}.
CC   -!- SUBCELLULAR LOCATION: Nucleus, nucleolus
CC       {ECO:0000256|PIRNR:PIRNR005586}.
CC   -!- SIMILARITY: Belongs to the archaeal rpoM/eukaryotic
CC       RPA12/RPB9/RPC11 RNA polymerase family.
CC       {ECO:0000256|PIRNR:PIRNR005586, ECO:0000256|RuleBase:RU003474}.
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DR   EMBL; CR382138; CAG88975.2; -; Genomic_DNA.
DR   RefSeq; XP_460643.2; XM_460643.1.
DR   STRING; 4959.XP_460643.2; -.
DR   EnsemblFungi; CAG88975; CAG88975; DEHA2F06556g.
DR   GeneID; 2904111; -.
DR   KEGG; dha:DEHA2F06556g; -.
DR   HOGENOM; HOG000228131; -.
DR   InParanoid; Q6BMC8; -.
DR   KO; K03019; -.
DR   OMA; MEFCDEC; -.
DR   OrthoDB; 1508693at2759; -.
DR   Proteomes; UP000000599; Chromosome F.
DR   GO; GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-KW.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   GO; GO:0006351; P:transcription, DNA-templated; IEA:InterPro.
DR   GO; GO:0042779; P:tRNA 3'-trailer cleavage; IEA:EnsemblFungi.
DR   CDD; cd10509; Zn-ribbon_RPC11; 1.
DR   InterPro; IPR001529; DNA-dir_RNA_pol_M/15kDasu.
DR   InterPro; IPR012164; Rpa12/Rpb9/Rpc10/TFS.
DR   InterPro; IPR034014; Zn_ribbon_RPC11_C.
DR   InterPro; IPR001222; Znf_TFIIS.
DR   Pfam; PF02150; RNA_POL_M_15KD; 1.
DR   Pfam; PF01096; TFIIS_C; 1.
DR   PIRSF; PIRSF005586; RNApol_RpoM; 1.
DR   SMART; SM00661; RPOL9; 1.
DR   SMART; SM00440; ZnF_C2C2; 1.
DR   PROSITE; PS51133; ZF_TFIIS_2; 1.
PE   3: Inferred from homology;
DR   PRODOM; Q6BMC8.
DR   SWISS-2DPAGE; Q6BMC8.
KW   Complete proteome {ECO:0000313|Proteomes:UP000000599};
KW   DNA-directed RNA polymerase {ECO:0000256|PIRNR:PIRNR005586,
KW   ECO:0000256|RuleBase:RU003474};
KW   Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00472,
KW   ECO:0000256|RuleBase:RU003474};
KW   Nucleus {ECO:0000256|PIRNR:PIRNR005586};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000599};
KW   Transcription {ECO:0000256|PIRNR:PIRNR005586,
KW   ECO:0000256|RuleBase:RU003474};
KW   Zinc {ECO:0000256|PROSITE-ProRule:PRU00472};
KW   Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00472}.
FT   DOMAIN       67    109       TFIIS-type. {ECO:0000259|PROSITE:
FT                                PS51133}.
FT   ZN_FING      67    109       TFIIS-type. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00472}.
SQ   SEQUENCE   111 AA;  12846 MW;  3B6ADF75F6296E52 CRC64;
     MLSFCPYCAN MLIMAQKDDG CNRFFCSTCP YEFKIDGFQM YDRKKLSRKE VDDVLGGEGA
     WDNVDQTLAQ CPIDSCGGDK AYFFQLQIRS ADEPMTTFYK CVKCSHQWRE N
//

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