(data stored in SCRATCH zone)

SWISSPROT: Q6FJJ3_CANGA

ID   Q6FJJ3_CANGA            Unreviewed;       315 AA.
AC   Q6FJJ3;
DT   19-JUL-2004, integrated into UniProtKB/TrEMBL.
DT   19-JUL-2004, sequence version 1.
DT   30-AUG-2017, entry version 67.
DE   RecName: Full=Transcription initiation factor IIE subunit beta {ECO:0000256|PIRNR:PIRNR016398};
GN   OrderedLocusNames=CAGL0M05863g {ECO:0000313|CGD:CAL0136691,
GN   ECO:0000313|EMBL:CAG62577.1};
OS   Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
OS   NRRL Y-65) (Yeast) (Torulopsis glabrata).
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
OC   Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Nakaseomyces;
OC   Nakaseomyces/Candida clade.
OX   NCBI_TaxID=284593 {ECO:0000313|Proteomes:UP000002428};
RN   [1] {ECO:0000313|EMBL:CAG62577.1, ECO:0000313|Proteomes:UP000002428}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65
RC   {ECO:0000313|Proteomes:UP000002428};
RX   PubMed=15229592; DOI=10.1038/nature02579;
RG   Genolevures;
RA   Dujon B., Sherman D., Fischer G., Durrens P., Casaregola S.,
RA   Lafontaine I., de Montigny J., Marck C., Neuveglise C., Talla E.,
RA   Goffard N., Frangeul L., Aigle M., Anthouard V., Babour A., Barbe V.,
RA   Barnay S., Blanchin S., Beckerich J.M., Beyne E., Bleykasten C.,
RA   Boisrame A., Boyer J., Cattolico L., Confanioleri F., de Daruvar A.,
RA   Despons L., Fabre E., Fairhead C., Ferry-Dumazet H., Groppi A.,
RA   Hantraye F., Hennequin C., Jauniaux N., Joyet P., Kachouri R.,
RA   Kerrest A., Koszul R., Lemaire M., Lesur I., Ma L., Muller H.,
RA   Nicaud J.M., Nikolski M., Oztas S., Ozier-Kalogeropoulos O.,
RA   Pellenz S., Potier S., Richard G.F., Straub M.L., Suleau A.,
RA   Swennene D., Tekaia F., Wesolowski-Louvel M., Westhof E., Wirth B.,
RA   Zeniou-Meyer M., Zivanovic I., Bolotin-Fukuhara M., Thierry A.,
RA   Bouchier C., Caudron B., Scarpelli C., Gaillardin C., Weissenbach J.,
RA   Wincker P., Souciet J.L.;
RT   "Genome evolution in yeasts.";
RL   Nature 430:35-44(2004).
CC   -!- FUNCTION: Recruits TFIIH to the initiation complex and stimulates
CC       the RNA polymerase II C-terminal domain kinase and DNA-dependent
CC       ATPase activities of TFIIH. Both TFIIH and TFIIE are required for
CC       promoter clearance by RNA polymerase.
CC       {ECO:0000256|PIRNR:PIRNR016398}.
CC   -!- SUBUNIT: Tetramer of two alpha and two beta chains.
CC       {ECO:0000256|PIRNR:PIRNR016398}.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|PIRNR:PIRNR016398,
CC       ECO:0000256|PROSITE-ProRule:PRU00682}.
CC   -!- SIMILARITY: Belongs to the TFIIE beta subunit family.
CC       {ECO:0000256|PIRNR:PIRNR016398, ECO:0000256|PROSITE-
CC       ProRule:PRU00682}.
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DR   EMBL; CR380959; CAG62577.1; -; Genomic_DNA.
DR   RefSeq; XP_449601.1; XM_449601.1.
DR   ProteinModelPortal; Q6FJJ3; -.
DR   STRING; 284593.XP_449601.1; -.
DR   EnsemblFungi; CAG62577; CAG62577; CAGL0M05863g.
DR   KEGG; cgr:CAGL0M05863g; -.
DR   CGD; CAL0136691; CAGL0M05863g.
DR   EuPathDB; FungiDB:CAGL0M05863g; -.
DR   eggNOG; KOG3095; Eukaryota.
DR   eggNOG; COG5174; LUCA.
DR   HOGENOM; HOG000216656; -.
DR   InParanoid; Q6FJJ3; -.
DR   KO; K03137; -.
DR   OMA; DLKDGWP; -.
DR   OrthoDB; EOG092C4G9W; -.
DR   Proteomes; UP000002428; Chromosome M.
DR   GO; GO:0005673; C:transcription factor TFIIE complex; IEA:UniProtKB-UniRule.
DR   GO; GO:0097550; C:transcriptional preinitiation complex; IEA:EnsemblFungi.
DR   GO; GO:0000993; F:RNA polymerase II core binding; IEA:EnsemblFungi.
DR   GO; GO:0003697; F:single-stranded DNA binding; IEA:EnsemblFungi.
DR   GO; GO:0001097; F:TFIIH-class transcription factor binding; IEA:EnsemblFungi.
DR   GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR   GO; GO:0006367; P:transcription initiation from RNA polymerase II promoter; IEA:UniProtKB-UniRule.
DR   InterPro; IPR016656; TFIIE-bsu.
DR   InterPro; IPR003166; TFIIE_bsu_DNA-bd.
DR   Pfam; PF02186; TFIIE_beta; 1.
DR   PIRSF; PIRSF016398; TFIIE-beta; 1.
DR   PROSITE; PS51351; TFIIE_BETA_C; 1.
PE   3: Inferred from homology;
DR   PRODOM; Q6FJJ3.
DR   SWISS-2DPAGE; Q6FJJ3.
KW   Complete proteome {ECO:0000313|Proteomes:UP000002428};
KW   DNA-binding {ECO:0000256|PIRNR:PIRNR016398, ECO:0000256|PROSITE-
KW   ProRule:PRU00682};
KW   Nucleus {ECO:0000256|PIRNR:PIRNR016398, ECO:0000256|PROSITE-
KW   ProRule:PRU00682};
KW   Reference proteome {ECO:0000313|Proteomes:UP000002428};
KW   Transcription {ECO:0000256|PIRNR:PIRNR016398, ECO:0000256|PROSITE-
KW   ProRule:PRU00682};
KW   Transcription regulation {ECO:0000256|PIRNR:PIRNR016398,
KW   ECO:0000256|PROSITE-ProRule:PRU00682}.
FT   DOMAIN      100    174       TFIIE beta DNA-binding.
FT                                {ECO:0000259|PROSITE:PS51351}.
FT   DNA_BIND    100    174       TFIIE beta. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00682}.
SQ   SEQUENCE   315 AA;  35666 MW;  067108043D45D32D CRC64;
     MSKSNPLLAN LKAFKSKVKS APVLGVPRSN SNSRANSNTS VNNSDNIVEI KDEDDTSATP
     KKRNRAATED EVDLIDDDSD YDSSPSKRVK PGSLAAAALQ ASQADISKSH DSSKLLWATE
     YIQKKGKPVP LTELMDYLSM KRDDKVIGLL KKLERIEFDE KKSTFKYLST YDVHSAQELL
     TLLKNQVTFK GISFKDLKDG WPQCEETIND LEEESQILVL RTKKDKTPRY VWYNRGGNLN
     CIDEEFVKVW ENVQLPQFTE LPRKLQELGL KPASIDPSSV KRQTTRVEVK KKRNRRGKIT
     NTHMAGILKD YSNKA
//

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