(data stored in SCRATCH zone)

SWISSPROT: Q6FJJ6_CANGA

ID   Q6FJJ6_CANGA            Unreviewed;       317 AA.
AC   Q6FJJ6;
DT   19-JUL-2004, integrated into UniProtKB/TrEMBL.
DT   19-JUL-2004, sequence version 1.
DT   30-AUG-2017, entry version 84.
DE   RecName: Full=tRNA pseudouridine synthase {ECO:0000256|RuleBase:RU003792};
DE            EC=5.4.99.- {ECO:0000256|RuleBase:RU003792};
GN   OrderedLocusNames=CAGL0M05797g {ECO:0000313|EMBL:CAG62574.1};
OS   Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
OS   NRRL Y-65) (Yeast) (Torulopsis glabrata).
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
OC   Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Nakaseomyces;
OC   Nakaseomyces/Candida clade.
OX   NCBI_TaxID=284593 {ECO:0000313|Proteomes:UP000002428};
RN   [1] {ECO:0000313|EMBL:CAG62574.1, ECO:0000313|Proteomes:UP000002428}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65
RC   {ECO:0000313|Proteomes:UP000002428};
RX   PubMed=15229592; DOI=10.1038/nature02579;
RG   Genolevures;
RA   Dujon B., Sherman D., Fischer G., Durrens P., Casaregola S.,
RA   Lafontaine I., de Montigny J., Marck C., Neuveglise C., Talla E.,
RA   Goffard N., Frangeul L., Aigle M., Anthouard V., Babour A., Barbe V.,
RA   Barnay S., Blanchin S., Beckerich J.M., Beyne E., Bleykasten C.,
RA   Boisrame A., Boyer J., Cattolico L., Confanioleri F., de Daruvar A.,
RA   Despons L., Fabre E., Fairhead C., Ferry-Dumazet H., Groppi A.,
RA   Hantraye F., Hennequin C., Jauniaux N., Joyet P., Kachouri R.,
RA   Kerrest A., Koszul R., Lemaire M., Lesur I., Ma L., Muller H.,
RA   Nicaud J.M., Nikolski M., Oztas S., Ozier-Kalogeropoulos O.,
RA   Pellenz S., Potier S., Richard G.F., Straub M.L., Suleau A.,
RA   Swennene D., Tekaia F., Wesolowski-Louvel M., Westhof E., Wirth B.,
RA   Zeniou-Meyer M., Zivanovic I., Bolotin-Fukuhara M., Thierry A.,
RA   Bouchier C., Caudron B., Scarpelli C., Gaillardin C., Weissenbach J.,
RA   Wincker P., Souciet J.L.;
RT   "Genome evolution in yeasts.";
RL   Nature 430:35-44(2004).
CC   -!- CATALYTIC ACTIVITY: tRNA uridine(38-40) = tRNA pseudouridine(38-
CC       40). {ECO:0000256|RuleBase:RU003792}.
CC   -!- SIMILARITY: Belongs to the tRNA pseudouridine synthase TruA
CC       family. {ECO:0000256|RuleBase:RU003792}.
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DR   EMBL; CR380959; CAG62574.1; -; Genomic_DNA.
DR   RefSeq; XP_449598.1; XM_449598.1.
DR   ProteinModelPortal; Q6FJJ6; -.
DR   STRING; 284593.XP_449598.1; -.
DR   EnsemblFungi; CAG62574; CAG62574; CAGL0M05797g.
DR   KEGG; cgr:CAGL0M05797g; -.
DR   EuPathDB; FungiDB:CAGL0M05797g; -.
DR   eggNOG; KOG2553; Eukaryota.
DR   eggNOG; COG0101; LUCA.
DR   InParanoid; Q6FJJ6; -.
DR   KO; K06173; -.
DR   OMA; KNKCDAR; -.
DR   OrthoDB; EOG092C2LVK; -.
DR   Proteomes; UP000002428; Chromosome M.
DR   GO; GO:0005739; C:mitochondrion; IEA:EnsemblFungi.
DR   GO; GO:0009982; F:pseudouridine synthase activity; IEA:EnsemblFungi.
DR   GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR   GO; GO:1990481; P:mRNA pseudouridine synthesis; IEA:EnsemblFungi.
DR   GO; GO:0031119; P:tRNA pseudouridine synthesis; IEA:EnsemblFungi.
DR   Gene3D; 3.30.70.660; -; 1.
DR   InterPro; IPR020103; PsdUridine_synth_cat_dom.
DR   InterPro; IPR001406; PsdUridine_synth_TruA.
DR   InterPro; IPR020097; PsdUridine_synth_TruA_a/b_dom.
DR   InterPro; IPR020095; PsdUridine_synth_TruA_C.
DR   PANTHER; PTHR11142; PTHR11142; 1.
DR   Pfam; PF01416; PseudoU_synth_1; 1.
DR   SUPFAM; SSF55120; SSF55120; 1.
DR   TIGRFAMs; TIGR00071; hisT_truA; 1.
PE   3: Inferred from homology;
DR   PRODOM; Q6FJJ6.
DR   SWISS-2DPAGE; Q6FJJ6.
KW   Complete proteome {ECO:0000313|Proteomes:UP000002428};
KW   Isomerase {ECO:0000256|RuleBase:RU003792};
KW   Reference proteome {ECO:0000313|Proteomes:UP000002428};
KW   tRNA processing {ECO:0000256|RuleBase:RU003792}.
FT   DOMAIN      146    267       PseudoU_synth_1. {ECO:0000259|Pfam:
FT                                PF01416}.
SQ   SEQUENCE   317 AA;  36069 MW;  81714185D5E2D0BC CRC64;
     MALVLGYLGT GYQGIQYNPP AHTIDNELFK ALVATNCISQ SNSDDFSKSS FSRATRTDKG
     VHALTNLVAL KMQRYEVPQQ VKAELNEILP DDIRIWDVVP VKKKFNARVM AGTRHYRYVI
     PTFLLQCGPH SDLSTSQLAR FKNIWNMFLG THNYYNFTPR RKDTNADSPQ NMRHMYSIQV
     SDPFTIAGST QWLSIAIHGQ SFLLHQIRKM VHYALSEYHR SSSDTKSMEL LETVDPDLTS
     ATALDTPTEQ YIPLAPAAGL YLHHPTFEGY NNQPAARRLQ VLDLSGYPAC ATFEDRIHTE
     IARSEHVFHE YMAVIRQ
//

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