(data stored in SCRATCH zone)

SWISSPROT: Q6FJN7_CANGA

ID   Q6FJN7_CANGA            Unreviewed;      1706 AA.
AC   Q6FJN7;
DT   19-JUL-2004, integrated into UniProtKB/TrEMBL.
DT   19-JUL-2004, sequence version 1.
DT   30-AUG-2017, entry version 84.
DE   SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CAG62533.1};
GN   OrderedLocusNames=CAGL0M04829g {ECO:0000313|CGD:CAL0136839,
GN   ECO:0000313|EMBL:CAG62533.1};
OS   Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
OS   NRRL Y-65) (Yeast) (Torulopsis glabrata).
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
OC   Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Nakaseomyces;
OC   Nakaseomyces/Candida clade.
OX   NCBI_TaxID=284593 {ECO:0000313|Proteomes:UP000002428};
RN   [1] {ECO:0000313|EMBL:CAG62533.1, ECO:0000313|Proteomes:UP000002428}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65
RC   {ECO:0000313|Proteomes:UP000002428};
RX   PubMed=15229592; DOI=10.1038/nature02579;
RG   Genolevures;
RA   Dujon B., Sherman D., Fischer G., Durrens P., Casaregola S.,
RA   Lafontaine I., de Montigny J., Marck C., Neuveglise C., Talla E.,
RA   Goffard N., Frangeul L., Aigle M., Anthouard V., Babour A., Barbe V.,
RA   Barnay S., Blanchin S., Beckerich J.M., Beyne E., Bleykasten C.,
RA   Boisrame A., Boyer J., Cattolico L., Confanioleri F., de Daruvar A.,
RA   Despons L., Fabre E., Fairhead C., Ferry-Dumazet H., Groppi A.,
RA   Hantraye F., Hennequin C., Jauniaux N., Joyet P., Kachouri R.,
RA   Kerrest A., Koszul R., Lemaire M., Lesur I., Ma L., Muller H.,
RA   Nicaud J.M., Nikolski M., Oztas S., Ozier-Kalogeropoulos O.,
RA   Pellenz S., Potier S., Richard G.F., Straub M.L., Suleau A.,
RA   Swennene D., Tekaia F., Wesolowski-Louvel M., Westhof E., Wirth B.,
RA   Zeniou-Meyer M., Zivanovic I., Bolotin-Fukuhara M., Thierry A.,
RA   Bouchier C., Caudron B., Scarpelli C., Gaillardin C., Weissenbach J.,
RA   Wincker P., Souciet J.L.;
RT   "Genome evolution in yeasts.";
RL   Nature 430:35-44(2004).
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DR   EMBL; CR380959; CAG62533.1; -; Genomic_DNA.
DR   RefSeq; XP_449557.1; XM_449557.1.
DR   ProteinModelPortal; Q6FJN7; -.
DR   STRING; 284593.XP_449557.1; -.
DR   EnsemblFungi; CAG62533; CAG62533; CAGL0M04829g.
DR   KEGG; cgr:CAGL0M04829g; -.
DR   CGD; CAL0136839; CAGL0M04829g.
DR   EuPathDB; FungiDB:CAGL0M04829g; -.
DR   eggNOG; KOG1070; Eukaryota.
DR   eggNOG; COG0539; LUCA.
DR   HOGENOM; HOG000167551; -.
DR   InParanoid; Q6FJN7; -.
DR   KO; K14792; -.
DR   OMA; RMKFFFK; -.
DR   OrthoDB; EOG092C03ZV; -.
DR   Proteomes; UP000002428; Chromosome M.
DR   GO; GO:0005730; C:nucleolus; IEA:EnsemblFungi.
DR   GO; GO:0032040; C:small-subunit processome; IEA:EnsemblFungi.
DR   GO; GO:0034512; F:box C/D snoRNA binding; IEA:EnsemblFungi.
DR   GO; GO:0034513; F:box H/ACA snoRNA binding; IEA:EnsemblFungi.
DR   GO; GO:0008266; F:poly(U) RNA binding; IEA:EnsemblFungi.
DR   GO; GO:0042134; F:rRNA primary transcript binding; IEA:EnsemblFungi.
DR   GO; GO:0034511; F:U3 snoRNA binding; IEA:EnsemblFungi.
DR   GO; GO:0034463; P:90S preribosome assembly; IEA:EnsemblFungi.
DR   GO; GO:0000480; P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IEA:EnsemblFungi.
DR   GO; GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IEA:EnsemblFungi.
DR   GO; GO:0000464; P:endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IEA:EnsemblFungi.
DR   GO; GO:0000472; P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IEA:EnsemblFungi.
DR   Gene3D; 1.25.40.10; -; 2.
DR   InterPro; IPR003107; HAT.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR022967; S1_dom.
DR   InterPro; IPR003029; S1_domain.
DR   InterPro; IPR011990; TPR-like_helical_dom.
DR   Pfam; PF00575; S1; 3.
DR   SMART; SM00386; HAT; 6.
DR   SMART; SM00316; S1; 12.
DR   SUPFAM; SSF48452; SSF48452; 1.
DR   SUPFAM; SSF50249; SSF50249; 12.
DR   PROSITE; PS50126; S1; 11.
PE   4: Predicted;
DR   PRODOM; Q6FJN7.
DR   SWISS-2DPAGE; Q6FJN7.
KW   Complete proteome {ECO:0000313|Proteomes:UP000002428};
KW   Reference proteome {ECO:0000313|Proteomes:UP000002428}.
FT   DOMAIN      111    220       S1 motif. {ECO:0000259|PROSITE:PS50126}.
FT   DOMAIN      317    389       S1 motif. {ECO:0000259|PROSITE:PS50126}.
FT   DOMAIN      489    559       S1 motif. {ECO:0000259|PROSITE:PS50126}.
FT   DOMAIN      586    655       S1 motif. {ECO:0000259|PROSITE:PS50126}.
FT   DOMAIN      674    748       S1 motif. {ECO:0000259|PROSITE:PS50126}.
FT   DOMAIN      773    842       S1 motif. {ECO:0000259|PROSITE:PS50126}.
FT   DOMAIN      872    948       S1 motif. {ECO:0000259|PROSITE:PS50126}.
FT   DOMAIN      980   1052       S1 motif. {ECO:0000259|PROSITE:PS50126}.
FT   DOMAIN     1065   1136       S1 motif. {ECO:0000259|PROSITE:PS50126}.
FT   DOMAIN     1154   1222       S1 motif. {ECO:0000259|PROSITE:PS50126}.
FT   DOMAIN     1242   1313       S1 motif. {ECO:0000259|PROSITE:PS50126}.
SQ   SEQUENCE   1706 AA;  191363 MW;  4D7996DF1691CFE7 CRC64;
     MSTSSDFPLS KEDGTRQPEK STLVRTTEEI SFPRGGSSAL TPLELKHVAN EAAHDVLFGN
     EKRPLTEDDA GKPKKKKKRS SKKDTETVTD DTTEQRSAII EHLNFNNVKE GTILLGQIDS
     ITKNDLRITF TDGLSGFVDL THISEQLTSL LEDIDEDMDS DSKEDDAEYE SSDDESEQKS
     LPNLRHYFKV GQWLRCAVTK NTALKPKNAK QKKRIELTIE PSVVNNFDVE DINKNTIIQC
     SVESIEDHGA TLDLGVPSLT GFIAKKDCTN FDELKPGSVF ISCITKKTDR SIVVSQDFSV
     KKNKMTSISS IDSVLPGQVV DLLCEEITDS GIVGKVFGSI SAFIGKPHLQ TFSEEDIKHK
     FSLGSNIPCR ILASVINKSG DRVLILSTLP HVISLNNTLG SIESLEAFPI GFIIDESVVK
     GRDSSYLYLA ISDKFIGRVH QSNLGEIIKQ DKLKSRVIGY DVADCIFELT TDPEKLKLKY
     IRSKDIPVGE VFNNCEILKA SSSGVELKLL GGQFTAFVPP LHISDIRLIY PERKFKIASK
     TKCRILNVDN HGHIIATMKK SLVNDEELEK PVIESFETAK SIKNKNEKTV GTVQSFNGHG
     CVIMFFGGVT GFLPKSEVSE VFVKRAEDHL RLGQTVQVKV LEVDEERRRI IVTCKVSNEE
     AQQQKSIIES LKIGQSIIET VVVEKTKDSV IVEIPDVGIR GVIYVGHISD ERIEQCRAEI
     KKIRIGSKLT GLVIDKDSRT QIFNLSLKKS LMKDAQNKRL PTTFAEITKF KKTDPLHGYV
     KSISSTGVFV AFTGKFVGLV LPSYAVESRQ VDIEKAFYSN QSVTAYLLRT DDDNERFLLT
     LKAPKVEKAA ETISAENIID TSIKSVKDIK LGKILDAKIK GVKKNQLNII LADNVHGRVD
     ISEVFDNYND IKDKKHPLSH YKANDKVRVK IIGHHDLKSH KSLPITHNFV KGTVFELTMK
     PSQLKSKDVK ELDIRDITVG DEIIAFVNNY QNSTLWLTVT PTIKAKLSIF DLSEETLMNI
     KNVEDDFPLG SVLKVNVTGK DQNKSILQVT QRNGKINSID DLKVGGHTIG KIVKVTPKYL
     LIELENKITG ISTALEALND FTEPLDQVFA GKENEFVKAK ITSVIADEKK VQLQLAEDES
     TVQKITSHSD LKVGEVVNGL VKTVTDKGLF VFLGKSVEAF VPVSKLSDSY LKEWKKFYKP
     MQPVVGKIVS CNEDDRILLT LRETEVNGDL KVLKNYSDIK PGDIFNGTVR NVTDFGVFVK
     LDNTANVTGL AHITEIADEV PEDIQSIFGV GDRVKAYVLK SNPEKKQLSL SLKASHFNTN
     ETITEKAESQ PQPRKIDEDQ DELMDDEVVY NSESEASDDE EAHSSKSTTV ISNDGGLSLS
     AGFDWTTSIL DQANASSDSE SDEEDFMESK RSKNKKKKSK NLVEDKTIDI NTRAPESVAD
     FERLIIGNPN SSVIWMNYMA FQLQLSEIDK ARELAERALK TINYREEAEK LNIWIAMLNL
     ENTFGSEETL EDVFTRSCQY MDSFTMHSKL IGIYQLSEKF DKASELFKIT TKKFGSEKTS
     IWVSWASFVL SQNEPDQVGT ILSSALKSLP KRNHIEVVRK FAQLEFSEGN PERGRSLFEG
     LLADAPKRID IWNVYLDQEI KQKDNKSRVE ELFERVIKMK ITRKQAKFFF NKWLQFEESN
     NDEKMTDYVK AKASEYVEKH TQKDEQ
//

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