(data stored in SCRATCH zone)

SWISSPROT: Q75BY4_ASHGO

ID   Q75BY4_ASHGO            Unreviewed;       677 AA.
AC   Q75BY4;
DT   05-JUL-2004, integrated into UniProtKB/TrEMBL.
DT   05-JUL-2004, sequence version 1.
DT   11-DEC-2019, entry version 97.
DE   SubName: Full=ACR136Cp {ECO:0000313|EMBL:AAS51362.1};
GN   ORFNames=AGOS_ACR136C {ECO:0000313|EMBL:AAS51362.1};
OS   Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
OS   (Yeast) (Eremothecium gossypii).
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC   Saccharomycetales; Saccharomycetaceae; Eremothecium.
OX   NCBI_TaxID=284811 {ECO:0000313|EMBL:AAS51362.1, ECO:0000313|Proteomes:UP000000591};
RN   [1] {ECO:0000313|EMBL:AAS51362.1, ECO:0000313|Proteomes:UP000000591}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056
RC   {ECO:0000313|Proteomes:UP000000591};
RX   PubMed=15001715; DOI=10.1126/science.1095781;
RA   Dietrich F.S., Voegeli S., Brachat S., Lerch A., Gates K., Steiner S.,
RA   Mohr C., Pohlmann R., Luedi P., Choi S., Wing R.A., Flavier A.,
RA   Gaffney T.D., Philippsen P.;
RT   "The Ashbya gossypii genome as a tool for mapping the ancient Saccharomyces
RT   cerevisiae genome.";
RL   Science 304:304-307(2004).
RN   [2] {ECO:0000313|Proteomes:UP000000591}
RP   GENOME REANNOTATION.
RC   STRAIN=ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056
RC   {ECO:0000313|Proteomes:UP000000591};
RX   PubMed=23749448; DOI=10.1534/g3.112.002881;
RA   Dietrich F.S., Voegeli S., Kuo S., Philippsen P.;
RT   "Genomes of Ashbya fungi isolated from insects reveal four mating-type
RT   loci, numerous translocations, lack of transposons, and distinct gene
RT   duplications.";
RL   G3 (Bethesda) 3:1225-1239(2013).
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DR   EMBL; AE016816; AAS51362.1; -; Genomic_DNA.
DR   RefSeq; NP_983538.1; NM_208891.2.
DR   STRING; 33169.AAS51362; -.
DR   EnsemblFungi; AAS51362; AAS51362; AGOS_ACR136C.
DR   GeneID; 4619670; -.
DR   KEGG; ago:AGOS_ACR136C; -.
DR   HOGENOM; HOG000203484; -.
DR   InParanoid; Q75BY4; -.
DR   KO; K06176; -.
DR   OMA; THYDIHI; -.
DR   Proteomes; UP000000591; Chromosome III.
DR   GO; GO:0031429; C:box H/ACA snoRNP complex; IEA:EnsemblFungi.
DR   GO; GO:0005737; C:cytoplasm; IEA:EnsemblFungi.
DR   GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR   GO; GO:0009982; F:pseudouridine synthase activity; IBA:GO_Central.
DR   GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR   GO; GO:0000455; P:enzyme-directed rRNA pseudouridine synthesis; IEA:EnsemblFungi.
DR   GO; GO:1990481; P:mRNA pseudouridine synthesis; IEA:EnsemblFungi.
DR   GO; GO:0031120; P:snRNA pseudouridine synthesis; IEA:EnsemblFungi.
DR   GO; GO:0031119; P:tRNA pseudouridine synthesis; IEA:EnsemblFungi.
DR   Gene3D; 3.30.2350.20; -; 1.
DR   InterPro; IPR020103; PsdUridine_synth_cat_dom_sf.
DR   InterPro; IPR001656; PsdUridine_synth_TruD.
DR   InterPro; IPR020119; PsdUridine_synth_TruD_CS.
DR   InterPro; IPR011760; PsdUridine_synth_TruD_insert.
DR   InterPro; IPR042214; TruD_catalytic.
DR   PANTHER; PTHR13326; PTHR13326; 1.
DR   Pfam; PF01142; TruD; 1.
DR   PIRSF; PIRSF037016; Pseudouridin_synth_euk_prd; 1.
DR   SUPFAM; SSF55120; SSF55120; 1.
DR   TIGRFAMs; TIGR00094; tRNA_TruD_broad; 1.
DR   PROSITE; PS50984; TRUD; 1.
DR   PROSITE; PS01268; UPF0024; 1.
PE   4: Predicted;
DR   PRODOM; Q75BY4.
DR   SWISS-2DPAGE; Q75BY4.
KW   Reference proteome {ECO:0000313|Proteomes:UP000000591}.
FT   DOMAIN          331..580
FT                   /note="TRUD"
FT                   /evidence="ECO:0000259|PROSITE:PS50984"
FT   REGION          81..103
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   677 AA;  76437 MW;  12F5E360DC5E8767 CRC64;
     MSQENLQKRA VEADHEAVVA KKAKTEDDGL KEIDVGITEY LSAELPGFSG QIKQRYSDFM
     VNEIQKDGTV VYLRDNGFKM PAKPKPSADQ VKAQQAEERE RRHNHAVEAE LRNQLVELLG
     EEDMQQIEAV YRNVTKMETT RSFDDKAART KIHQLLRKAF NNELESVTSA SNTFQIALAN
     RKTRVSKEDY VEQTRDENGV INWGYGPSKN CVHFTMYKEN KDTMDVVNII AKFLRVPTKA
     IRFAGTKDRR AVTCQRLSIG RIGLDRINAL NNALKGVVLG GFSFEDEPLS LGDLNGNEFV
     IVIRDVSTDP NSATPLESIL DRGCELLKNR GFINYFGMQR FGTFSVSTHE VGKELLLENW
     KNAVDLILSE QNNVLPASKE ARKIWAETGD AESALRKMPR QCLAENSILH TLATQKKNEG
     EYESGAYYAA IMKIPRNLRT MYVHAYQSYV WNTVTSKRMA LFGLHAVAGD LVLVESDENA
     KVNIAEDSED ADDSEFSEDL RGAQFVRAKA LTEEDIASGK WTIDDVVLPT PGFDTTYPEN
     ETLKALYKEI MTKDGLDPFD MRRKVRDFSL AGSYRHILQK TKDITYQIIH YKDSTQQLIN
     SDFEILKNKR AKENGRNYMK DKLDRICADK GGDKTAVVLK FKLGVSAYAT MALRELMKAE
     TSRRGDLCSV RTASGQV
//

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