(data stored in SCRATCH zone)

SWISSPROT: Q82QT1_STRAW

ID   Q82QT1_STRAW            Unreviewed;       312 AA.
AC   Q82QT1;
DT   01-JUN-2003, integrated into UniProtKB/TrEMBL.
DT   01-JUN-2003, sequence version 1.
DT   08-MAY-2019, entry version 115.
DE   SubName: Full=Putative RNA polymerase ECF-subfamily sigma factor {ECO:0000313|EMBL:BAC68134.1};
GN   Name=sig3 {ECO:0000313|EMBL:BAC68134.1};
GN   ORFNames=SAVERM_424 {ECO:0000313|EMBL:BAC68134.1};
OS   Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 /
OS   NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680).
OC   Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae;
OC   Streptomyces.
OX   NCBI_TaxID=227882 {ECO:0000313|EMBL:BAC68134.1, ECO:0000313|Proteomes:UP000000428};
RN   [1] {ECO:0000313|EMBL:BAC68134.1, ECO:0000313|Proteomes:UP000000428}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 /
RC   NRRL 8165 / MA-4680 {ECO:0000313|Proteomes:UP000000428};
RX   PubMed=11572948; DOI=10.1073/pnas.211433198;
RA   Omura S., Ikeda H., Ishikawa J., Hanamoto A., Takahashi C.,
RA   Shinose M., Takahashi Y., Horikawa H., Nakazawa H., Osonoe T.,
RA   Kikuchi H., Shiba T., Sakaki Y., Hattori M.;
RT   "Genome sequence of an industrial microorganism Streptomyces
RT   avermitilis: deducing the ability of producing secondary
RT   metabolites.";
RL   Proc. Natl. Acad. Sci. U.S.A. 98:12215-12220(2001).
RN   [2] {ECO:0000313|EMBL:BAC68134.1, ECO:0000313|Proteomes:UP000000428}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 /
RC   NRRL 8165 / MA-4680 {ECO:0000313|Proteomes:UP000000428};
RX   PubMed=12692562; DOI=10.1038/nbt820;
RA   Ikeda H., Ishikawa J., Hanamoto A., Shinose M., Kikuchi H., Shiba T.,
RA   Sakaki Y., Hattori M., Omura S.;
RT   "Complete genome sequence and comparative analysis of the industrial
RT   microorganism Streptomyces avermitilis.";
RL   Nat. Biotechnol. 21:526-531(2003).
CC   -!- SIMILARITY: Belongs to the sigma-70 factor family.
CC       {ECO:0000256|SAAS:SAAS00611284}.
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DR   EMBL; BA000030; BAC68134.1; -; Genomic_DNA.
DR   RefSeq; WP_010981862.1; NZ_JZJK01000088.1.
DR   STRING; 227882.SAV_424; -.
DR   EnsemblBacteria; BAC68134; BAC68134; SAVERM_424.
DR   KEGG; sma:SAVERM_424; -.
DR   eggNOG; ENOG4105DGB; Bacteria.
DR   eggNOG; COG1595; LUCA.
DR   HOGENOM; HOG000220478; -.
DR   KO; K03088; -.
DR   OMA; GPADTFE; -.
DR   OrthoDB; 1335404at2; -.
DR   BioCyc; SAVE227882:G1G23-478-MONOMER; -.
DR   Proteomes; UP000000428; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR   GO; GO:0006352; P:DNA-templated transcription, initiation; IEA:InterPro.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR032710; NTF2-like_dom_sf.
DR   InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR   InterPro; IPR007627; RNA_pol_sigma70_r2.
DR   InterPro; IPR013249; RNA_pol_sigma70_r4_t2.
DR   InterPro; IPR013325; RNA_pol_sigma_r2.
DR   InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   Pfam; PF04542; Sigma70_r2; 1.
DR   Pfam; PF08281; Sigma70_r4_2; 1.
DR   SUPFAM; SSF54427; SSF54427; 1.
DR   SUPFAM; SSF88659; SSF88659; 1.
DR   SUPFAM; SSF88946; SSF88946; 1.
DR   TIGRFAMs; TIGR02937; sigma70-ECF; 1.
PE   3: Inferred from homology;
DR   PRODOM; Q82QT1.
DR   SWISS-2DPAGE; Q82QT1.
KW   Complete proteome {ECO:0000313|Proteomes:UP000000428};
KW   DNA-binding {ECO:0000256|SAAS:SAAS00611263};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000428};
KW   Sigma factor {ECO:0000256|SAAS:SAAS00611278};
KW   Transcription {ECO:0000256|SAAS:SAAS00611290};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS00611294}.
FT   DOMAIN       10     72       Sigma70_r2. {ECO:0000259|Pfam:PF04542}.
FT   DOMAIN      108    158       Sigma70_r4_2. {ECO:0000259|Pfam:PF08281}.
SQ   SEQUENCE   312 AA;  34101 MW;  3C04625A050F73A3 CRC64;
     MDIAAIDRFE ASQGRLASLA YRLLGSAADA EDAVQDTFLR WQAPYRERVE VPEAWLTKVV
     TNLCLDRLRS AQARHEQAAG AWLPEPLLDS DPMLGPADTF EQRESVSLAV LTLLERLSPV
     ERAVYVLREA FSYSHAEIAG ILDITESASQ QHVHRARIRV AAERRRGSET DPASARRVVE
     EFLAAATSGR TERLVALLTD DVTAVSDGAG LSKRLLHYKT RERVASYVRA GFKPTPAKRR
     LAGGSPAFYI ALVNGSPAVL AVVDDRVVGA VAFEVSDGKV ASLRGIAAAD RLARLNEAWR
     QHEPDAPAIN AW
//

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