(data stored in ACNUC7421 zone)

SWISSPROT: Q88QU8_PSEPK

ID   Q88QU8_PSEPK            Unreviewed;      1247 AA.
AC   Q88QU8;
DT   01-JUN-2003, integrated into UniProtKB/TrEMBL.
DT   01-JUN-2003, sequence version 1.
DT   08-MAY-2019, entry version 98.
DE   SubName: Full=Sensory box protein {ECO:0000313|EMBL:AAN66017.1};
GN   OrderedLocusNames=PP_0386 {ECO:0000313|EMBL:AAN66017.1};
OS   Pseudomonas putida (strain ATCC 47054 / DSM 6125 / NCIMB 11950 /
OS   KT2440).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC   Pseudomonadaceae; Pseudomonas.
OX   NCBI_TaxID=160488 {ECO:0000313|EMBL:AAN66017.1, ECO:0000313|Proteomes:UP000000556};
RN   [1] {ECO:0000313|EMBL:AAN66017.1, ECO:0000313|Proteomes:UP000000556}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 47054 / DSM 6125 / NCIMB 11950 / KT2440
RC   {ECO:0000313|Proteomes:UP000000556};
RX   PubMed=12534463; DOI=10.1046/j.1462-2920.2002.00366.x;
RA   Nelson K.E., Weinel C., Paulsen I.T., Dodson R.J., Hilbert H.,
RA   Martins dos Santos V.A., Fouts D.E., Gill S.R., Pop M., Holmes M.,
RA   Brinkac L., Beanan M., DeBoy R.T., Daugherty S., Kolonay J.,
RA   Madupu R., Nelson W., White O., Peterson J., Khouri H., Hance I.,
RA   Chris Lee P., Holtzapple E., Scanlan D., Tran K., Moazzez A.,
RA   Utterback T., Rizzo M., Lee K., Kosack D., Moestl D., Wedler H.,
RA   Lauber J., Stjepandic D., Hoheisel J., Straetz M., Heim S.,
RA   Kiewitz C., Eisen J.A., Timmis K.N., Dusterhoft A., Tummler B.,
RA   Fraser C.M.;
RT   "Complete genome sequence and comparative analysis of the
RT   metabolically versatile Pseudomonas putida KT2440.";
RL   Environ. Microbiol. 4:799-808(2002).
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DR   EMBL; AE015451; AAN66017.1; -; Genomic_DNA.
DR   RefSeq; NP_742553.1; NC_002947.4.
DR   RefSeq; WP_010951734.1; NC_002947.4.
DR   STRING; 160488.PP_0386; -.
DR   PRIDE; Q88QU8; -.
DR   EnsemblBacteria; AAN66017; AAN66017; PP_0386.
DR   GeneID; 1044096; -.
DR   KEGG; ppu:PP_0386; -.
DR   PATRIC; fig|160488.4.peg.416; -.
DR   eggNOG; ENOG4105BZU; Bacteria.
DR   eggNOG; COG0834; LUCA.
DR   eggNOG; COG2199; LUCA.
DR   eggNOG; COG2200; LUCA.
DR   eggNOG; COG2202; LUCA.
DR   HOGENOM; HOG000136246; -.
DR   OMA; ASWPPFE; -.
DR   BioCyc; PPUT160488:G1G01-423-MONOMER; -.
DR   Proteomes; UP000000556; Chromosome.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   CDD; cd01948; EAL; 1.
DR   CDD; cd01949; GGDEF; 1.
DR   CDD; cd00130; PAS; 4.
DR   Gene3D; 3.20.20.450; -; 1.
DR   InterPro; IPR001633; EAL_dom.
DR   InterPro; IPR035919; EAL_sf.
DR   InterPro; IPR000160; GGDEF_dom.
DR   InterPro; IPR029787; Nucleotide_cyclase.
DR   InterPro; IPR001610; PAC.
DR   InterPro; IPR000014; PAS.
DR   InterPro; IPR000700; PAS-assoc_C.
DR   InterPro; IPR035965; PAS-like_dom_sf.
DR   InterPro; IPR013655; PAS_fold_3.
DR   InterPro; IPR001638; Solute-binding_3/MltF_N.
DR   Pfam; PF00563; EAL; 1.
DR   Pfam; PF00990; GGDEF; 1.
DR   Pfam; PF08447; PAS_3; 1.
DR   Pfam; PF13426; PAS_9; 3.
DR   Pfam; PF00497; SBP_bac_3; 1.
DR   SMART; SM00052; EAL; 1.
DR   SMART; SM00267; GGDEF; 1.
DR   SMART; SM00086; PAC; 4.
DR   SMART; SM00091; PAS; 4.
DR   SMART; SM00062; PBPb; 1.
DR   SUPFAM; SSF141868; SSF141868; 1.
DR   SUPFAM; SSF55073; SSF55073; 1.
DR   SUPFAM; SSF55785; SSF55785; 4.
DR   TIGRFAMs; TIGR00254; GGDEF; 1.
DR   TIGRFAMs; TIGR00229; sensory_box; 4.
DR   PROSITE; PS50883; EAL; 1.
DR   PROSITE; PS50887; GGDEF; 1.
DR   PROSITE; PS50113; PAC; 3.
DR   PROSITE; PS50112; PAS; 3.
PE   4: Predicted;
DR   PRODOM; Q88QU8.
DR   SWISS-2DPAGE; Q88QU8.
KW   Complete proteome {ECO:0000313|Proteomes:UP000000556};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000556};
KW   Signal {ECO:0000256|SAM:SignalP};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   SIGNAL        1     21       {ECO:0000256|SAM:SignalP}.
FT   CHAIN        22   1247       {ECO:0000256|SAM:SignalP}.
FT                                /FTId=PRO_5004305531.
FT   TRANSMEM    267    289       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN      309    366       PAS. {ECO:0000259|PROSITE:PS50112}.
FT   DOMAIN      384    434       PAC. {ECO:0000259|PROSITE:PS50113}.
FT   DOMAIN      435    482       PAS. {ECO:0000259|PROSITE:PS50112}.
FT   DOMAIN      508    558       PAC. {ECO:0000259|PROSITE:PS50113}.
FT   DOMAIN      680    726       PAS. {ECO:0000259|PROSITE:PS50112}.
FT   DOMAIN      753    805       PAC. {ECO:0000259|PROSITE:PS50113}.
FT   DOMAIN      837    970       GGDEF. {ECO:0000259|PROSITE:PS50887}.
FT   DOMAIN      979   1233       EAL. {ECO:0000259|PROSITE:PS50883}.
SQ   SEQUENCE   1247 AA;  139393 MW;  61B588192CE6DED3 CRC64;
     MSLKPAILLL ILILWNTTAG ALTLTDEENA WLAAHPQLKL GVDASWPPFE FRDQEGRYQG
     LAADYIAMIQ QRLGVTFKPV EPSSWTEVLA QARESRIDLL PGIMSTPERQ GFLAFTRPYL
     DFPIVILAHK GGAQPRKLAD LYGLKIAVVE NYAPHELLRT HHPDLNLVAL PNVSSTLQAL
     ATDQVDAVVG DLASSIWSLR QLKLDGLYVS GETPYRYQLA MAVPRDKSVL VGILDKVMAD
     MSSSEISQIQ QHWVGNVVDQ RMFWSDLLVY GLPTVLLLMA VLAVVIRINR RLSSEISRRI
     ALEQELRSSE YHYRGLVESL SAIAWEADAN DFTYSYVSPH AEDLLGYPLS DWLRPGFWRS
     ILHPEDALWA QAYCDSETAA GRDHSLDYRV IRADGQPLWV RNIVSMIEHG HQPVMRGLMI
     DISETKRTED ALRLSEQKFA SVFQQCPDIL LIARHSDGCL LEVNEAFEEQ IGLPPDQVIG
     RTATDLDLWG VEGSGPLLLE RLHQGGIRNL EMSFRRSNGQ LFTGLTSAET FELDGTPALV
     VAVRDISQLK ETQQQLQTSE EKFAKAFHAS PDGLLLSRQS DGLLLEVNEG FCRLTGYDLN
     PTIDQTSLDL GIWVDLNERK RLVDQLNRDG FVRDFTCHIR RSDGQIRLCE LSARPLPITG
     VDCMLTIARD ITERHLMQEK LQLAATVFEN TAEGVLITDI DQRISAVNRA FSEITGYSEI
     EALGQTPRLL ASGQHDSAFY LAMWHQLTAE GHWQGEIYNK RKNGELYPSW LTISAVRNSD
     REITHFVAVF ADISSIKHAQ AKLDYQAHHD PLTGLPNRTL FENRLQGVLT CAQVSNRQGA
     VLFLDLDRFK HINDSLGHPV GDLLLKGIAQ RLKEQVRDVD TVARLGGDEF IILLPGLHKP
     SDASTIANKL LACFNAPFQA GEHEFFTSAS IGISLYPQDG TDVSTLIRNA DAAMYRSKAK
     GRNRVEAYTR DLTAQASERI ALEHELRRAV ERNEMSLCFQ PKLSLKTQSL VGAEALIRWS
     HPTFGEVPPE HFIHLAEENG TILQLGDWVL EQACRQMQAW KQHYQPFGPL SINLAGAQLR
     HPHLARRIEQ LLKHHQLKAG DLQLEITENF IMSQAEEALA VLYQLKKLGV QLAIDDFGTG
     YSSLSYLKRL PLDILKIDKS FIRGLPDDPH DAAIARAIIA LGRSMQLTII AEGVENQAQQ
     RFLAAEGCEQ IQGYIVSLPL PPEEFAAAFL RIALSDLSDG TGAKPSL
//

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