(data stored in SCRATCH zone)

SWISSPROT: Q8X6F3_ECO57

ID   Q8X6F3_ECO57            Unreviewed;       284 AA.
AC   Q8X6F3; Q7AHA3;
DT   01-MAR-2002, integrated into UniProtKB/TrEMBL.
DT   01-MAR-2002, sequence version 1.
DT   05-JUL-2017, entry version 118.
DE   SubName: Full=Putative ARAC-type regulatory protein {ECO:0000313|EMBL:AAG54639.1};
GN   Name=ykgD {ECO:0000313|EMBL:AAG54639.1};
GN   OrderedLocusNames=ECs0343 {ECO:0000313|EMBL:BAB33766.1}, Z0382
GN   {ECO:0000313|EMBL:AAG54639.1};
OS   Escherichia coli O157:H7.
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC   Enterobacteriaceae; Escherichia.
OX   NCBI_TaxID=83334 {ECO:0000313|Proteomes:UP000002519};
RN   [1] {ECO:0000313|EMBL:BAB33766.1, ECO:0000313|Proteomes:UP000000558}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=O157:H7 / Sakai / RIMD 0509952 / EHEC
RC   {ECO:0000313|Proteomes:UP000000558}, and Sakai
RC   {ECO:0000313|EMBL:BAB33766.1};
RX   PubMed=11258796; DOI=10.1093/dnares/8.1.11;
RA   Hayashi T., Makino K., Ohnishi M., Kurokawa K., Ishii K., Yokoyama K.,
RA   Han C., Ohtsubo E., Nakayama K., Murata T., Tanaka M., Tobe T.,
RA   Iida T., Takami H., Honda T., Sasakawa C., Ogasawara N., Yasunaga T.,
RA   Kuhara S., Shiba T., Hattori M., Shinagawa H.;
RT   "Complete genome sequence of enterohemorrhagic Escherichia coli
RT   O157:H7 and genomic comparison with a laboratory strain K-12.";
RL   DNA Res. 8:11-22(2001).
RN   [2] {ECO:0000313|EMBL:AAG54639.1, ECO:0000313|Proteomes:UP000002519}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EDL933 {ECO:0000313|EMBL:AAG54639.1}, and O157:H7 / EDL933 /
RC   ATCC 700927 / EHEC {ECO:0000313|Proteomes:UP000002519};
RX   PubMed=11206551; DOI=10.1038/35054089;
RA   Perna N.T., Plunkett G.III., Burland V., Mau B., Glasner J.D.,
RA   Rose D.J., Mayhew G.F., Evans P.S., Gregor J., Kirkpatrick H.A.,
RA   Posfai G., Hackett J., Klink S., Boutin A., Shao Y., Miller L.,
RA   Grotbeck E.J., Davis N.W., Lim A., Dimalanta E., Potamousis K.,
RA   Apodaca J., Anantharaman T.S., Lin J., Yen G., Schwartz D.C.,
RA   Welch R.A., Blattner F.R.;
RT   "Genome sequence of enterohaemorrhagic Escherichia coli O157:H7.";
RL   Nature 409:529-533(2001).
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DR   EMBL; AE005174; AAG54639.1; -; Genomic_DNA.
DR   EMBL; BA000007; BAB33766.1; -; Genomic_DNA.
DR   PIR; C85522; C85522.
DR   PIR; G90671; G90671.
DR   RefSeq; NP_308370.1; NC_002695.1.
DR   RefSeq; WP_000339591.1; NZ_MWVM01000048.1.
DR   ProteinModelPortal; Q8X6F3; -.
DR   STRING; 155864.Z0382; -.
DR   EnsemblBacteria; AAG54639; AAG54639; Z0382.
DR   EnsemblBacteria; BAB33766; BAB33766; BAB33766.
DR   GeneID; 914442; -.
DR   KEGG; ece:Z0382; -.
DR   KEGG; ecs:ECs0343; -.
DR   PATRIC; fig|386585.9.peg.437; -.
DR   eggNOG; ENOG4108K01; Bacteria.
DR   eggNOG; COG2207; LUCA.
DR   HOGENOM; HOG000136816; -.
DR   Proteomes; UP000000558; Chromosome.
DR   Proteomes; UP000002519; Chromosome.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0003700; F:transcription factor activity, sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR   InterPro; IPR032783; AraC_lig.
DR   InterPro; IPR009057; Homeobox-like.
DR   InterPro; IPR018060; HTH_AraC.
DR   InterPro; IPR011051; RmlC_Cupin.
DR   InterPro; IPR020449; Tscrpt_reg_HTH_AraC-type.
DR   Pfam; PF12852; Cupin_6; 1.
DR   Pfam; PF12833; HTH_18; 1.
DR   PRINTS; PR00032; HTHARAC.
DR   SMART; SM00342; HTH_ARAC; 1.
DR   SUPFAM; SSF46689; SSF46689; 2.
DR   SUPFAM; SSF51182; SSF51182; 1.
DR   PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE   4: Predicted;
DR   PRODOM; Q8X6F3.
DR   SWISS-2DPAGE; Q8X6F3.
KW   Complete proteome {ECO:0000313|Proteomes:UP000000558,
KW   ECO:0000313|Proteomes:UP000002519};
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00593,
KW   ECO:0000256|SAAS:SAAS00048696};
KW   Transcription {ECO:0000256|PROSITE-ProRule:PRU00593};
KW   Transcription regulation {ECO:0000256|PROSITE-ProRule:PRU00593}.
FT   DOMAIN      177    278       HTH araC/xylS-type DNA-binding.
FT                                {ECO:0000259|PROSITE:PS01124}.
FT   DNA_BIND    197    218       H-T-H motif. {ECO:0000256|PROSITE-
FT                                ProRule:PRU00593}.
FT   DNA_BIND    245    268       H-T-H motif. {ECO:0000256|PROSITE-
FT                                ProRule:PRU00593}.
SQ   SEQUENCE   284 AA;  31490 MW;  1891199B0BBD6737 CRC64;
     MDALSRLLML NAPQGTIDKN CVLGSDWQLP HGAGELSVIR WHALTQGAAK LEMPTGEIFT
     LRPGNVVLLP QNSAHRLSHV DNESTCIVCG TLRLQHSARY FLTSLPETLF LAPVNHSVEY
     NWLREAIPFL QQESRSAMPG VDALCSQICA TFFTLAVREW IAQVNTEKNI LSLLLHPRLG
     AVIQQMLEMP GHAWSVESLA SIAHMSRASF AQLFRDVSGT TPLAVLTKLR LQIAAQMFSR
     EMLPVVVIAE SVGYASESSF HKAFVREFGC TPGEYRERVR QLAP
//

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