(data stored in SCRATCH zone)

SWISSPROT: Q8XBQ3_ECO57

ID   Q8XBQ3_ECO57            Unreviewed;       266 AA.
AC   Q8XBQ3; Q7AGP6;
DT   01-MAR-2002, integrated into UniProtKB/TrEMBL.
DT   01-MAR-2002, sequence version 1.
DT   07-JUN-2017, entry version 107.
DE   SubName: Full=Putative transcriptional regulator LYSR-type {ECO:0000313|EMBL:BAB34090.1};
GN   Name=ybeF {ECO:0000313|EMBL:AAG54963.1};
GN   OrderedLocusNames=ECs0667 {ECO:0000313|EMBL:BAB34090.1}, Z0774
GN   {ECO:0000313|EMBL:AAG54963.1};
OS   Escherichia coli O157:H7.
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC   Enterobacteriaceae; Escherichia.
OX   NCBI_TaxID=83334 {ECO:0000313|Proteomes:UP000002519};
RN   [1] {ECO:0000313|EMBL:BAB34090.1, ECO:0000313|Proteomes:UP000000558}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=O157:H7 / Sakai / RIMD 0509952 / EHEC
RC   {ECO:0000313|Proteomes:UP000000558}, and Sakai
RC   {ECO:0000313|EMBL:BAB34090.1};
RX   PubMed=11258796; DOI=10.1093/dnares/8.1.11;
RA   Hayashi T., Makino K., Ohnishi M., Kurokawa K., Ishii K., Yokoyama K.,
RA   Han C., Ohtsubo E., Nakayama K., Murata T., Tanaka M., Tobe T.,
RA   Iida T., Takami H., Honda T., Sasakawa C., Ogasawara N., Yasunaga T.,
RA   Kuhara S., Shiba T., Hattori M., Shinagawa H.;
RT   "Complete genome sequence of enterohemorrhagic Escherichia coli
RT   O157:H7 and genomic comparison with a laboratory strain K-12.";
RL   DNA Res. 8:11-22(2001).
RN   [2] {ECO:0000313|EMBL:AAG54963.1, ECO:0000313|Proteomes:UP000002519}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EDL933 {ECO:0000313|EMBL:AAG54963.1}, and O157:H7 / EDL933 /
RC   ATCC 700927 / EHEC {ECO:0000313|Proteomes:UP000002519};
RX   PubMed=11206551; DOI=10.1038/35054089;
RA   Perna N.T., Plunkett G.III., Burland V., Mau B., Glasner J.D.,
RA   Rose D.J., Mayhew G.F., Evans P.S., Gregor J., Kirkpatrick H.A.,
RA   Posfai G., Hackett J., Klink S., Boutin A., Shao Y., Miller L.,
RA   Grotbeck E.J., Davis N.W., Lim A., Dimalanta E., Potamousis K.,
RA   Apodaca J., Anantharaman T.S., Lin J., Yen G., Schwartz D.C.,
RA   Welch R.A., Blattner F.R.;
RT   "Genome sequence of enterohaemorrhagic Escherichia coli O157:H7.";
RL   Nature 409:529-533(2001).
CC   -!- CAUTION: Lacks conserved residue(s) required for the propagation
CC       of feature annotation. {ECO:0000256|PROSITE-ProRule:PRU00253}.
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DR   EMBL; AE005174; AAG54963.1; -; Genomic_DNA.
DR   EMBL; BA000007; BAB34090.1; -; Genomic_DNA.
DR   PIR; C90712; C90712.
DR   PIR; G85562; G85562.
DR   RefSeq; NP_308694.2; NC_002695.1.
DR   STRING; 155864.Z0774; -.
DR   EnsemblBacteria; AAG54963; AAG54963; Z0774.
DR   EnsemblBacteria; BAB34090; BAB34090; BAB34090.
DR   GeneID; 917027; -.
DR   KEGG; ece:Z0774; -.
DR   KEGG; ecs:ECs0667; -.
DR   PATRIC; fig|386585.9.peg.778; -.
DR   HOGENOM; HOG000267879; -.
DR   Proteomes; UP000000558; Chromosome.
DR   Proteomes; UP000002519; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003700; F:transcription factor activity, sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR005119; LysR_subst-bd.
DR   InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR   InterPro; IPR011991; WHTH_DNA-bd_dom.
DR   Pfam; PF00126; HTH_1; 1.
DR   Pfam; PF03466; LysR_substrate; 1.
DR   SUPFAM; SSF46785; SSF46785; 1.
DR   PROSITE; PS50931; HTH_LYSR; 1.
PE   4: Predicted;
DR   PRODOM; Q8XBQ3.
DR   SWISS-2DPAGE; Q8XBQ3.
KW   Complete proteome {ECO:0000313|Proteomes:UP000000558,
KW   ECO:0000313|Proteomes:UP000002519};
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00253,
KW   ECO:0000256|SAAS:SAAS00661574};
KW   Transcription {ECO:0000256|PROSITE-ProRule:PRU00253,
KW   ECO:0000256|SAAS:SAAS00661597};
KW   Transcription regulation {ECO:0000256|PROSITE-ProRule:PRU00253,
KW   ECO:0000256|SAAS:SAAS00661673}.
FT   DOMAIN        1     35       HTH lysR-type DNA-binding.
FT                                {ECO:0000259|PROSITE:PS50931}.
SQ   SEQUENCE   266 AA;  30207 MW;  A8FB213DC09DA5DB CRC64;
     MLNLTPSAIS QSIQKLRVIF PDPLFIRKGQ GVTPTAFAMH LHEYISQGLE SILGALDIEG
     SYDKQRTITI ATTPSVGALV LPVIYRAIKT HYPQLLLRNP PISDAENQLS QFQTDLIIDN
     MFCTNRTVQH HVLFTDNMVL ICREGNPLLS LEDDRETIDN AAHVLLLPEG QNFSGLRQRI
     QEMFPDRQIS FTSYNILTIA ALVANSDMLA IIPSRFYNLF SRCWPLEKLP FPSLNEEQID
     FSIHYNKFSL RDPILHGVID VIRNAF
//

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