(data stored in SCRATCH zone)

SWISSPROT: Q93IY9_STRCO

ID   Q93IY9_STRCO            Unreviewed;       309 AA.
AC   Q93IY9;
DT   01-DEC-2001, integrated into UniProtKB/TrEMBL.
DT   01-DEC-2001, sequence version 1.
DT   08-MAY-2019, entry version 101.
DE   SubName: Full=LysR-family transcriptional regulatory protein {ECO:0000313|EMBL:CAC44209.1};
GN   OrderedLocusNames=SCO5096 {ECO:0000313|EMBL:CAC44209.1};
OS   Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145).
OC   Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae;
OC   Streptomyces; Streptomyces albidoflavus group.
OX   NCBI_TaxID=100226 {ECO:0000313|Proteomes:UP000001973};
RN   [1] {ECO:0000313|EMBL:CAC44209.1, ECO:0000313|Proteomes:UP000001973}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC BAA-471 / A3(2) / M145
RC   {ECO:0000313|Proteomes:UP000001973};
RX   PubMed=12000953; DOI=10.1038/417141a;
RA   Bentley S.D., Chater K.F., Cerdeno-Tarraga A.M., Challis G.L.,
RA   Thomson N.R., James K.D., Harris D.E., Quail M.A., Kieser H.,
RA   Harper D., Bateman A., Brown S., Chandra G., Chen C.W., Collins M.,
RA   Cronin A., Fraser A., Goble A., Hidalgo J., Hornsby T., Howarth S.,
RA   Huang C.H., Kieser T., Larke L., Murphy L., Oliver K., O'Neil S.,
RA   Rabbinowitsch E., Rajandream M.A., Rutherford K., Rutter S.,
RA   Seeger K., Saunders D., Sharp S., Squares R., Squares S., Taylor K.,
RA   Warren T., Wietzorrek A., Woodward J., Barrell B.G., Parkhill J.,
RA   Hopwood D.A.;
RT   "Complete genome sequence of the model actinomycete Streptomyces
RT   coelicolor A3(2).";
RL   Nature 417:141-147(2002).
CC   -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC       {ECO:0000256|SAAS:SAAS01096700}.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; AL939122; CAC44209.1; -; Genomic_DNA.
DR   RefSeq; NP_629246.1; NC_003888.3.
DR   RefSeq; WP_011030054.1; NC_003888.3.
DR   STRING; 100226.SCO5096; -.
DR   EnsemblBacteria; CAC44209; CAC44209; CAC44209.
DR   GeneID; 1100537; -.
DR   KEGG; sco:SCO5096; -.
DR   PATRIC; fig|100226.15.peg.5176; -.
DR   HOGENOM; HOG000233514; -.
DR   InParanoid; Q93IY9; -.
DR   OMA; CELAVAW; -.
DR   PhylomeDB; Q93IY9; -.
DR   Proteomes; UP000001973; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR005119; LysR_subst-bd.
DR   InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   Pfam; PF00126; HTH_1; 1.
DR   Pfam; PF03466; LysR_substrate; 1.
DR   PRINTS; PR00039; HTHLYSR.
DR   SUPFAM; SSF46785; SSF46785; 1.
DR   PROSITE; PS50931; HTH_LYSR; 1.
PE   3: Inferred from homology;
DR   PRODOM; Q93IY9.
DR   SWISS-2DPAGE; Q93IY9.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001973};
KW   DNA-binding {ECO:0000256|SAAS:SAAS01096662};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001973};
KW   Transcription {ECO:0000256|SAAS:SAAS01096725};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS01096646}.
FT   DOMAIN        7     64       HTH lysR-type. {ECO:0000259|PROSITE:
FT                                PS50931}.
SQ   SEQUENCE   309 AA;  33496 MW;  B482C3D706E76FC2 CRC64;
     MGMTTDVHVR ELRYFATVAE ELHFTRAAEL LYVSQPALSK QIRALERQLG AELFHRGPRG
     VTLTEAGTAL LPHARRMLAD WTEGAAAVEA ARAARRDTLV VGMSTSPGRG GLLPAIRSRF
     TAAHPEAVLQ LRQMSWEDPT AGLADGTADV AYVWLPLPDA DRYAWTVVAE EPRLVALPDS
     HPLAAREEID FADLAGEPFL ALPPEAGVLR DFWLALDERR ALDGPAARPP RVGAEISGTE
     ETYEALVAGL GICLVATGNA PLITLGGVVT RPVRGLSPSR YALARRREDE GRALVRGYVE
     ACRRVTDRA
//

If you have problems or comments...

PBIL Back to PBIL home page