(data stored in SCRATCH zone)

SWISSPROT: Q9EWW4_STRCO

ID   Q9EWW4_STRCO            Unreviewed;       304 AA.
AC   Q9EWW4;
DT   01-MAR-2001, integrated into UniProtKB/TrEMBL.
DT   01-MAR-2001, sequence version 1.
DT   08-MAY-2019, entry version 106.
DE   SubName: Full=Putative ECF-sigma factor {ECO:0000313|EMBL:CAD30927.1};
GN   OrderedLocusNames=SCO4938 {ECO:0000313|EMBL:CAD30927.1};
OS   Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145).
OC   Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae;
OC   Streptomyces; Streptomyces albidoflavus group.
OX   NCBI_TaxID=100226 {ECO:0000313|Proteomes:UP000001973};
RN   [1] {ECO:0000313|EMBL:CAD30927.1, ECO:0000313|Proteomes:UP000001973}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC BAA-471 / A3(2) / M145
RC   {ECO:0000313|Proteomes:UP000001973};
RX   PubMed=12000953; DOI=10.1038/417141a;
RA   Bentley S.D., Chater K.F., Cerdeno-Tarraga A.M., Challis G.L.,
RA   Thomson N.R., James K.D., Harris D.E., Quail M.A., Kieser H.,
RA   Harper D., Bateman A., Brown S., Chandra G., Chen C.W., Collins M.,
RA   Cronin A., Fraser A., Goble A., Hidalgo J., Hornsby T., Howarth S.,
RA   Huang C.H., Kieser T., Larke L., Murphy L., Oliver K., O'Neil S.,
RA   Rabbinowitsch E., Rajandream M.A., Rutherford K., Rutter S.,
RA   Seeger K., Saunders D., Sharp S., Squares R., Squares S., Taylor K.,
RA   Warren T., Wietzorrek A., Woodward J., Barrell B.G., Parkhill J.,
RA   Hopwood D.A.;
RT   "Complete genome sequence of the model actinomycete Streptomyces
RT   coelicolor A3(2).";
RL   Nature 417:141-147(2002).
CC   -!- SIMILARITY: Belongs to the sigma-70 factor family.
CC       {ECO:0000256|SAAS:SAAS00611284}.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; AL939122; CAD30927.1; -; Genomic_DNA.
DR   RefSeq; NP_629091.1; NC_003888.3.
DR   RefSeq; WP_011029962.1; NC_003888.3.
DR   STRING; 100226.SCO4938; -.
DR   EnsemblBacteria; CAD30927; CAD30927; CAD30927.
DR   GeneID; 1100379; -.
DR   KEGG; sco:SCO4938; -.
DR   PATRIC; fig|100226.15.peg.5018; -.
DR   HOGENOM; HOG000220478; -.
DR   InParanoid; Q9EWW4; -.
DR   KO; K03088; -.
DR   OMA; ASRICLS; -.
DR   PhylomeDB; Q9EWW4; -.
DR   Proteomes; UP000001973; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR   GO; GO:0006352; P:DNA-templated transcription, initiation; IEA:InterPro.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR032710; NTF2-like_dom_sf.
DR   InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR   InterPro; IPR007627; RNA_pol_sigma70_r2.
DR   InterPro; IPR013249; RNA_pol_sigma70_r4_t2.
DR   InterPro; IPR013325; RNA_pol_sigma_r2.
DR   InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   Pfam; PF04542; Sigma70_r2; 1.
DR   Pfam; PF08281; Sigma70_r4_2; 1.
DR   SUPFAM; SSF54427; SSF54427; 1.
DR   SUPFAM; SSF88659; SSF88659; 1.
DR   SUPFAM; SSF88946; SSF88946; 1.
DR   TIGRFAMs; TIGR02937; sigma70-ECF; 1.
PE   3: Inferred from homology;
DR   PRODOM; Q9EWW4.
DR   SWISS-2DPAGE; Q9EWW4.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001973};
KW   DNA-binding {ECO:0000256|SAAS:SAAS00611263};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001973};
KW   Sigma factor {ECO:0000256|SAAS:SAAS00611278};
KW   Transcription {ECO:0000256|SAAS:SAAS00611290};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS00611294}.
FT   DOMAIN       11     74       Sigma70_r2. {ECO:0000259|Pfam:PF04542}.
FT   DOMAIN      120    169       Sigma70_r4_2. {ECO:0000259|Pfam:PF08281}.
SQ   SEQUENCE   304 AA;  33368 MW;  B368858E5D4E2031 CRC64;
     MTTRSAPVTG ERRQLINVAY RMLGSLTDAE DAVQEAYARW YAMPADRREA VGSPGAWLTT
     VVSRVCLNHL RSARVRRELY VGQWLPEPLA DPAERTAART PGIASDPADL ITLDESVGMA
     FLVVLDSMSP AQRVAFVLHD VFRYPFPEVA RIVGRTPAAC RRLASTARRG IRTAQESAAT
     STAQDAVVVR DLKRAWETND VDALIRLLDP EVTAVGDGGG VVRTLEHPLR GREPIVRGLL
     RFGPRQSGQT LLERTVNGRP GLVGCQDGTV VTVYSFGVSD HRVRHLWAMR NPEKLRSWAT
     APAA
//

If you have problems or comments...

PBIL Back to PBIL home page