(data stored in SCRATCH zone)

SWISSPROT: Q9FFK7_ARATH

ID   Q9FFK7_ARATH            Unreviewed;       260 AA.
AC   Q9FFK7;
DT   01-MAR-2001, integrated into UniProtKB/TrEMBL.
DT   01-MAR-2001, sequence version 1.
DT   05-JUL-2017, entry version 114.
DE   SubName: Full=AT5G05670 protein {ECO:0000313|EMBL:BAH19709.1};
DE   SubName: Full=At5g05670 {ECO:0000313|EMBL:AAU95413.1};
DE   SubName: Full=Signal recognition particle binding protein {ECO:0000313|EMBL:AED90906.1};
DE   SubName: Full=Signal recognition particle receptor beta subunit-like protein {ECO:0000313|EMBL:BAB09661.1};
GN   Name=MJJ3.7 {ECO:0000313|EMBL:AED90906.1};
GN   Synonyms=MJJ3_7 {ECO:0000313|EMBL:AED90906.1};
GN   OrderedLocusNames=At5g05670 {ECO:0000313|Araport:AT5G05670,
GN   ECO:0000313|EMBL:AED90906.1};
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
OC   Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae;
OC   Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1] {ECO:0000313|EMBL:BAB09661.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=9330910; DOI=10.1093/dnares/4.3.215;
RA   Sato S., Kotani H., Nakamura Y., Kaneko T., Asamizu E., Fukami M.,
RA   Miyajima N., Tabata S.;
RT   "Structural analysis of Arabidopsis thaliana chromosome 5. I. Sequence
RT   features of the 1.6 Mb regions covered by twenty physically assigned
RT   P1 clones.";
RL   DNA Res. 4:215-230(1997).
RN   [2] {ECO:0000313|EMBL:AED90906.1, ECO:0000313|Proteomes:UP000006548}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX   PubMed=11130714; DOI=10.1038/35048507;
RG   Kazusa DNA Research Institute;
RG   Cold Spring Harbor and Washington University in St Louis Sequencing Consortium;
RG   European Union Arabidopsis Genome Sequencing Consortium;
RA   Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA   Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K.,
RA   Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S.,
RA   Nakazaki N., Naruo K., Okumura S., Shinpo S., Takeuchi C., Wada T.,
RA   Watanabe A., Yamada M., Yasuda M., Sato S., de la Bastide M.,
RA   Huang E., Spiegel L., Gnoj L., O'Shaughnessy A., Preston R.,
RA   Habermann K., Murray J., Johnson D., Rohlfing T., Nelson J.,
RA   Stoneking T., Pepin K., Spieth J., Sekhon M., Armstrong J., Becker M.,
RA   Belter E., Cordum H., Cordes M., Courtney L., Courtney W., Dante M.,
RA   Du H., Edwards J., Fryman J., Haakensen B., Lamar E., Latreille P.,
RA   Leonard S., Meyer R., Mulvaney E., Ozersky P., Riley A., Strowmatt C.,
RA   Wagner-McPherson C., Wollam A., Yoakum M., Bell M., Dedhia N.,
RA   Parnell L., Shah R., Rodriguez M., See L.H., Vil D., Baker J.,
RA   Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.,
RA   Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA   Volckaert G., Wambutt R., Dusterhoft A., Stiekema W., Pohl T.,
RA   Entian K.D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.A.,
RA   McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U.,
RA   Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W.,
RA   Mooijman P., Lankhorst R.K., Weitzenegger T., Bothe G., Rose M.,
RA   Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S.,
RA   Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G.,
RA   Mayer K., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.W.,
RA   Bevan M., Fransz P.;
RT   "Sequence and analysis of chromosome 5 of the plant Arabidopsis
RT   thaliana.";
RL   Nature 408:823-826(2000).
RN   [3] {ECO:0000313|EMBL:AAU95413.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Cheuk R., Chen H., Kim C.J., Shinn P., Ecker J.R.;
RT   "Arabidopsis ORF clones.";
RL   Submitted (OCT-2004) to the EMBL/GenBank/DDBJ databases.
RN   [4] {ECO:0000313|EMBL:AAV43791.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Shinn P., Chen H., Cheuk R., Kim C.J., Ecker J.R.;
RT   "Aradidopsis ORF clones.";
RL   Submitted (NOV-2004) to the EMBL/GenBank/DDBJ databases.
RN   [5] {ECO:0000313|EMBL:BAH19709.1}
RP   NUCLEOTIDE SEQUENCE.
RC   TISSUE=Roots {ECO:0000313|EMBL:BAH19709.1}, and Rosette leaf
RC   {ECO:0000313|EMBL:BAH19952.1};
RA   Iida K., Fukami-Kobayashi K., Toyoda A., Sakaki Y., Kobayashi M.,
RA   Seki M., Shinozaki K.;
RT   "Analysis of multiple occurrences of alternative splicing events in
RT   Arabidopsis thaliana using novel sequenced full-length cDNAs.";
RL   DNA Res. 0:0-0(2009).
RN   [6] {ECO:0000313|EMBL:AED90906.1}
RP   NUCLEOTIDE SEQUENCE.
RG   TAIR;
RA   Swarbreck D., Lamesch P., Wilks C., Huala E.;
RL   Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases.
RN   [7] {ECO:0000213|PubMed:22223895}
RP   IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RX   PubMed=22223895; DOI=10.1074/mcp.M111.015131;
RA   Bienvenut W.V., Sumpton D., Martinez A., Lilla S., Espagne C.,
RA   Meinnel T., Giglione C.;
RT   "Comparative large-scale characterisation of plant vs. mammal proteins
RT   reveals similar and idiosyncratic N-alpha acetylation features.";
RL   Mol. Cell. Proteomics 11:M111.015131-M111.015131(2012).
RN   [8] {ECO:0000313|EMBL:AED90906.1, ECO:0000313|Proteomes:UP000006548}
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RG   The Arabidopsis Information Portal (Araport);
RL   Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; BT015877; AAU95413.1; -; mRNA.
DR   EMBL; BT020189; AAV43791.1; -; mRNA.
DR   EMBL; CP002688; AED90906.1; -; Genomic_DNA.
DR   EMBL; CP002688; AED90907.1; -; Genomic_DNA.
DR   EMBL; AB005237; BAB09661.1; -; Genomic_DNA.
DR   EMBL; AK317015; BAH19709.1; -; mRNA.
DR   EMBL; AK317276; BAH19952.1; -; mRNA.
DR   RefSeq; NP_196186.1; NM_120649.5.
DR   RefSeq; NP_974735.1; NM_203006.3.
DR   UniGene; At.46385; -.
DR   SMR; Q9FFK7; -.
DR   IntAct; Q9FFK7; 1.
DR   STRING; 3702.AT5G05670.1; -.
DR   EnsemblPlants; AT5G05670.1; AT5G05670.1; AT5G05670.
DR   EnsemblPlants; AT5G05670.2; AT5G05670.2; AT5G05670.
DR   GeneID; 830451; -.
DR   Gramene; AT5G05670.1; AT5G05670.1; AT5G05670.
DR   Gramene; AT5G05670.2; AT5G05670.2; AT5G05670.
DR   KEGG; ath:AT5G05670; -.
DR   Araport; AT5G05670; -.
DR   TAIR; locus:2166409; AT5G05670.
DR   eggNOG; KOG0090; Eukaryota.
DR   eggNOG; COG2229; LUCA.
DR   HOGENOM; HOG000241847; -.
DR   KO; K12272; -.
DR   OMA; NKQDQTT; -.
DR   OrthoDB; EOG09360MF5; -.
DR   Proteomes; UP000006548; Chromosome 5.
DR   GO; GO:0005783; C:endoplasmic reticulum; IDA:TAIR.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005886; C:plasma membrane; IDA:TAIR.
DR   GO; GO:0005785; C:signal recognition particle receptor complex; IBA:GO_Central.
DR   GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR   GO; GO:0005047; F:signal recognition particle binding; IBA:GO_Central.
DR   GO; GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
DR   CDD; cd04105; SR_beta; 1.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR024156; Small_GTPase_ARF.
DR   InterPro; IPR019009; SRP_receptor_beta_su.
DR   Pfam; PF09439; SRPRB; 1.
DR   SUPFAM; SSF52540; SSF52540; 1.
DR   PROSITE; PS51417; ARF; 1.
PE   1: Evidence at protein level;
DR   PRODOM; Q9FFK7.
DR   SWISS-2DPAGE; Q9FFK7.
KW   Complete proteome {ECO:0000313|Proteomes:UP000006548};
KW   GTP-binding {ECO:0000256|SAAS:SAAS00496914};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Nucleotide-binding {ECO:0000256|SAAS:SAAS00496910};
KW   Receptor {ECO:0000313|EMBL:BAB09661.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006548};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     30     51       Helical. {ECO:0000256|SAM:Phobius}.
SQ   SEQUENCE   260 AA;  29076 MW;  A5A4E6D5FCFFDDFC CRC64;
     MENLEDLKIL AEQWSHQGIE YLQKIPPNQL YAAIGVLLFT TILLFLSIRL VRRTKSNTVL
     LSGLTGSGKT VLFYQLRDGS SHQGTVTSME PNEGTFVLHS ENTKKGKIKP VHLVDVPGHS
     RLRPKLEEFL PQAAAIVFVV DALEFLPNCR AASEYLYEIL TNANVVKKKI PVLLCCNKTD
     KLTAHTKEFI RKQMEKEIEK LRASRSAVST ADIANDFTIG IEGEVFSFTH CSNKVTVAEA
     SGLTGETIQI EDFIREYIKP
//

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