(data stored in SCRATCH zone)

SWISSPROT: Q9LFC7_ARATH

ID   Q9LFC7_ARATH            Unreviewed;       353 AA.
AC   Q9LFC7;
DT   01-OCT-2000, integrated into UniProtKB/TrEMBL.
DT   01-OCT-2000, sequence version 1.
DT   30-AUG-2017, entry version 122.
DE   SubName: Full=Concanavalin A-like lectin family protein {ECO:0000313|EMBL:AED90298.1};
DE   SubName: Full=Lectin-like protein {ECO:0000313|EMBL:CAB69837.1};
GN   OrderedLocusNames=At5g01090 {ECO:0000313|Araport:AT5G01090,
GN   ECO:0000313|EMBL:AED90298.1};
GN   ORFNames=F7J8.70 {ECO:0000313|EMBL:AED90298.1}, F7J8_70
GN   {ECO:0000313|EMBL:CAB69837.1};
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
OC   Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae;
OC   Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1] {ECO:0000313|EMBL:AED90298.1, ECO:0000313|Proteomes:UP000006548}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX   PubMed=11130714; DOI=10.1038/35048507;
RG   Kazusa DNA Research Institute;
RG   Cold Spring Harbor and Washington University in St Louis Sequencing Consortium;
RG   European Union Arabidopsis Genome Sequencing Consortium;
RA   Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA   Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K.,
RA   Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S.,
RA   Nakazaki N., Naruo K., Okumura S., Shinpo S., Takeuchi C., Wada T.,
RA   Watanabe A., Yamada M., Yasuda M., Sato S., de la Bastide M.,
RA   Huang E., Spiegel L., Gnoj L., O'Shaughnessy A., Preston R.,
RA   Habermann K., Murray J., Johnson D., Rohlfing T., Nelson J.,
RA   Stoneking T., Pepin K., Spieth J., Sekhon M., Armstrong J., Becker M.,
RA   Belter E., Cordum H., Cordes M., Courtney L., Courtney W., Dante M.,
RA   Du H., Edwards J., Fryman J., Haakensen B., Lamar E., Latreille P.,
RA   Leonard S., Meyer R., Mulvaney E., Ozersky P., Riley A., Strowmatt C.,
RA   Wagner-McPherson C., Wollam A., Yoakum M., Bell M., Dedhia N.,
RA   Parnell L., Shah R., Rodriguez M., See L.H., Vil D., Baker J.,
RA   Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.,
RA   Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA   Volckaert G., Wambutt R., Dusterhoft A., Stiekema W., Pohl T.,
RA   Entian K.D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.A.,
RA   McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U.,
RA   Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W.,
RA   Mooijman P., Lankhorst R.K., Weitzenegger T., Bothe G., Rose M.,
RA   Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S.,
RA   Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G.,
RA   Mayer K., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.W.,
RA   Bevan M., Fransz P.;
RT   "Sequence and analysis of chromosome 5 of the plant Arabidopsis
RT   thaliana.";
RL   Nature 408:823-826(2000).
RN   [2] {ECO:0000313|EMBL:CAB69837.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Bevan M., Zimmermann W., Grueneisen A., Wambutt R., Kalicki J.,
RA   Wohldmann P., Smith A., Bancroft I., Mewes H.W., Rudd S., Lemcke K.,
RA   Mayer K.F.X.;
RL   Submitted (JAN-2000) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|EMBL:CAB69837.1}
RP   NUCLEOTIDE SEQUENCE.
RA   EU Arabidopsis sequencing project;
RL   Submitted (JUL-2000) to the EMBL/GenBank/DDBJ databases.
RN   [4] {ECO:0000313|EMBL:BAF00398.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Morosawa T.,
RA   Kamiya A., Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K.,
RA   Kohara Y., Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K.,
RA   Akiyama K., Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J.,
RA   Hayashizaki Y., Shinozaki K.;
RT   "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL   Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN   [5] {ECO:0000313|EMBL:AED90298.1}
RP   NUCLEOTIDE SEQUENCE.
RG   TAIR;
RA   Swarbreck D., Lamesch P., Wilks C., Huala E.;
RL   Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases.
RN   [6] {ECO:0000313|EMBL:AED90298.1, ECO:0000313|Proteomes:UP000006548}
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RG   The Arabidopsis Information Portal (Araport);
RL   Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the leguminous lectin family.
CC       {ECO:0000256|SAAS:SAAS00587135}.
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DR   EMBL; CP002688; AED90298.1; -; Genomic_DNA.
DR   EMBL; AK228471; BAF00398.1; -; mRNA.
DR   EMBL; AL137189; CAB69837.1; -; Genomic_DNA.
DR   PIR; T45949; T45949.
DR   RefSeq; NP_195729.1; NM_120187.3.
DR   UniGene; At.27998; -.
DR   STRING; 3702.AT5G01090.1; -.
DR   EnsemblPlants; AT5G01090.1; AT5G01090.1; AT5G01090.
DR   GeneID; 831840; -.
DR   Gramene; AT5G01090.1; AT5G01090.1; AT5G01090.
DR   KEGG; ath:AT5G01090; -.
DR   Araport; AT5G01090; -.
DR   TAIR; locus:2150114; AT5G01090.
DR   eggNOG; ENOG410IJYK; Eukaryota.
DR   eggNOG; ENOG41122PY; LUCA.
DR   OMA; RVQYRTP; -.
DR   OrthoDB; EOG09360G8N; -.
DR   Proteomes; UP000006548; Chromosome 5.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0030246; F:carbohydrate binding; IEA:UniProtKB-KW.
DR   CDD; cd06899; lectin_legume_LecRK_Arcelin_Co; 1.
DR   InterPro; IPR013320; ConA-like_dom.
DR   InterPro; IPR001220; Legume_lectin_dom.
DR   Pfam; PF00139; Lectin_legB; 1.
DR   SUPFAM; SSF49899; SSF49899; 1.
PE   2: Evidence at transcript level;
DR   PRODOM; Q9LFC7.
DR   SWISS-2DPAGE; Q9LFC7.
KW   Complete proteome {ECO:0000313|Proteomes:UP000006548};
KW   Lectin {ECO:0000256|SAAS:SAAS00479709, ECO:0000313|EMBL:AED90298.1};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006548};
KW   Signal {ECO:0000256|SAM:SignalP};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   SIGNAL        1     22       {ECO:0000256|SAM:SignalP}.
FT   CHAIN        23    353       {ECO:0000256|SAM:SignalP}.
FT                                /FTId=PRO_5010148291.
FT   TRANSMEM    290    315       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN       28    265       Lectin_legB. {ECO:0000259|Pfam:PF00139}.
SQ   SEQUENCE   353 AA;  38853 MW;  0B81361577416951 CRC64;
     MAVFKTLAFL FVLSIVIYQS VAVTDVNSSF SFNGFVKAPS FDNNVALFGD SKLVHGGPSI
     QLTDSVSRSE GRVIYKKPIR LFQGKERNFS GSFSTSFSFS MSDEIGSVLA FIMVPRGLDL
     RLFGRKGNNS SSGLGFLLKH KVVAVEFGIS KRGNHVGILV GRPESGKVRK LSSFGHHFNE
     EKRLNCWIDY EASSKRIEVR LSLSAALKPV DPFVSYSVDL AKLWKDGKFM VGLTSANGNT
     SKPVYLHSWS FKLRHPSMRI HSQPLDPNDV SKTVKEGEKT VEVKGKGKCI WRILGALVLG
     AVCGTLGAMF ALYLWTICGN RQSMAIVPEE CADEKADILV TKADVVVEEE VKK
//

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