(data stored in SCRATCH zone)

SWISSPROT: Q9SCL4_ARATH

ID   Q9SCL4_ARATH            Unreviewed;       140 AA.
AC   Q9SCL4;
DT   01-MAY-2000, integrated into UniProtKB/TrEMBL.
DT   01-MAY-2000, sequence version 1.
DT   30-AUG-2017, entry version 115.
DE   SubName: Full=At3g49420 {ECO:0000313|EMBL:AAP21342.1};
DE   SubName: Full=Got1/Sft2-like vescicle transport protein family {ECO:0000313|EMBL:AED90342.1};
DE   SubName: Full=Uncharacterized protein At3g49420; T9C5.20 {ECO:0000313|EMBL:AAL32919.1};
DE   SubName: Full=Uncharacterized protein At5g01430 {ECO:0000313|EMBL:AAK76549.1};
DE   SubName: Full=Uncharacterized protein T10O8_140 {ECO:0000313|EMBL:CAB81926.1};
DE   SubName: Full=Uncharacterized protein T9C5.20 {ECO:0000313|EMBL:CAB62447.1};
GN   Name=T9C5.20 {ECO:0000313|EMBL:CAB62447.1};
GN   Synonyms=T10O8_140 {ECO:0000313|EMBL:CAB81926.1};
GN   OrderedLocusNames=At3g49420 {ECO:0000313|Araport:AT3G49420,
GN   ECO:0000313|EMBL:AEE78540.1}, At3g49420/T9C5.20
GN   {ECO:0000313|EMBL:AAL32919.1}, At5g01430
GN   {ECO:0000313|Araport:AT5G01430};
GN   ORFNames=T10O8.140 {ECO:0000313|EMBL:AED90342.1};
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
OC   Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae;
OC   Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1] {ECO:0000313|EMBL:CAB62447.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Rieger M., Gabel C., Mueller-Auer S., Schaefer M., Zipp M.,
RA   Mewes H.W., Lemcke K., Mayer K.F.X., Quetier F., Salanoubat M.;
RL   Submitted (NOV-1999) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:AEE78540.1, ECO:0000313|Proteomes:UP000006548}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX   PubMed=11130713; DOI=10.1038/35048706;
RG   European Union Chromosome 3 Arabidopsis Sequencing Consortium;
RG   Institute for Genomic Research;
RG   Kazusa DNA Research Institute;
RA   Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M.,
RA   Fartmann B., Valle G., Blocker H., Perez-Alonso M., Obermaier B.,
RA   Delseny M., Boutry M., Grivell L.A., Mache R., Puigdomenech P.,
RA   De Simone V., Choisne N., Artiguenave F., Robert C., Brottier P.,
RA   Wincker P., Cattolico L., Weissenbach J., Saurin W., Quetier F.,
RA   Schafer M., Muller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E.,
RA   Drzonek H., Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H.,
RA   Voss H., Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M.,
RA   Pallavicini A., Toppo S., Simionati B., Conrad A., Hornischer K.,
RA   Kauer G., Lohnert T.H., Nordsiek G., Reichelt J., Scharfe M.,
RA   Schon O., Bargues M., Terol J., Climent J., Navarro P., Collado C.,
RA   Perez-Perez A., Ottenwalder B., Duchemin D., Cooke R., Laudie M.,
RA   Berger-Llauro C., Purnelle B., Masuy D., de Haan M., Maarse A.C.,
RA   Alcaraz J.P., Cottet A., Casacuberta E., Monfort A., Argiriou A.,
RA   flores M., Liguori R., Vitale D., Mannhaupt G., Haase D., Schoof H.,
RA   Rudd S., Zaccaria P., Mewes H.W., Mayer K.F., Kaul S., Town C.D.,
RA   Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M., Walts A.,
RA   Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B., Maiti R.,
RA   Wu D., Peterson J., Van Aken S., Pai G., Militscher J., Sellers P.,
RA   Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA   Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T.,
RA   Nakamura Y., Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T.,
RA   Idesawa K., Kawashima K., Kishida Y., Kiyokawa C., Kohara M.,
RA   Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N.,
RA   Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M.,
RA   Tabata S.;
RT   "Sequence and analysis of chromosome 3 of the plant Arabidopsis
RT   thaliana.";
RL   Nature 408:820-822(2000).
RN   [3] {ECO:0000313|EMBL:AED90342.1, ECO:0000313|Proteomes:UP000006548}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX   PubMed=11130714; DOI=10.1038/35048507;
RG   Kazusa DNA Research Institute;
RG   Cold Spring Harbor and Washington University in St Louis Sequencing Consortium;
RG   European Union Arabidopsis Genome Sequencing Consortium;
RA   Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA   Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K.,
RA   Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S.,
RA   Nakazaki N., Naruo K., Okumura S., Shinpo S., Takeuchi C., Wada T.,
RA   Watanabe A., Yamada M., Yasuda M., Sato S., de la Bastide M.,
RA   Huang E., Spiegel L., Gnoj L., O'Shaughnessy A., Preston R.,
RA   Habermann K., Murray J., Johnson D., Rohlfing T., Nelson J.,
RA   Stoneking T., Pepin K., Spieth J., Sekhon M., Armstrong J., Becker M.,
RA   Belter E., Cordum H., Cordes M., Courtney L., Courtney W., Dante M.,
RA   Du H., Edwards J., Fryman J., Haakensen B., Lamar E., Latreille P.,
RA   Leonard S., Meyer R., Mulvaney E., Ozersky P., Riley A., Strowmatt C.,
RA   Wagner-McPherson C., Wollam A., Yoakum M., Bell M., Dedhia N.,
RA   Parnell L., Shah R., Rodriguez M., See L.H., Vil D., Baker J.,
RA   Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.,
RA   Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA   Volckaert G., Wambutt R., Dusterhoft A., Stiekema W., Pohl T.,
RA   Entian K.D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.A.,
RA   McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U.,
RA   Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W.,
RA   Mooijman P., Lankhorst R.K., Weitzenegger T., Bothe G., Rose M.,
RA   Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S.,
RA   Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G.,
RA   Mayer K., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.W.,
RA   Bevan M., Fransz P.;
RT   "Sequence and analysis of chromosome 5 of the plant Arabidopsis
RT   thaliana.";
RL   Nature 408:823-826(2000).
RN   [4] {ECO:0000313|EMBL:CAB62447.1}
RP   NUCLEOTIDE SEQUENCE.
RA   EU Arabidopsis sequencing project;
RL   Submitted (FEB-2000) to the EMBL/GenBank/DDBJ databases.
RN   [5] {ECO:0000313|EMBL:CAB81926.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Bevan M., Pohl T., Weizenegger T., Bancroft I., Mewes H.W., Rudd S.,
RA   Lemcke K., Mayer K.F.X.;
RL   Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases.
RN   [6] {ECO:0000313|EMBL:CAB81926.1}
RP   NUCLEOTIDE SEQUENCE.
RA   EU Arabidopsis sequencing project;
RL   Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases.
RN   [7] {ECO:0000313|EMBL:AAK76549.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Yamada K., Liu S.X., Sakano H., Pham P.K., Banh J., Chung M.K.,
RA   Goldsmith A.D., Lee J.M., Quach H.L., Toriumi M., Yu G., Bowser L.,
RA   Carninci P., Chen H., Cheuk R., Hayashizaki Y., Ishida J., Jones T.,
RA   Kamiya A., Karlin-Neumann G., Kawai J., Kim C., Lam B., Lin J.,
RA   Miranda M., Narusaka M., Nguyen M., Palm C.J., Sakurai T., Satou M.,
RA   Seki M., Shinn P., Southwick A., Shinozaki K., Davis R.W., Ecker J.R.,
RA   Theologis A.;
RT   "Arabidopsis Full Length cDNA Clones.";
RL   Submitted (JUL-2001) to the EMBL/GenBank/DDBJ databases.
RN   [8] {ECO:0000313|EMBL:AAL32919.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Southwick A., Karlin-Neumann G., Nguyen M., Lam B., Miranda M.,
RA   Palm C.J., Bowser L., Jones T., Banh J., Carninci P., Chen H.,
RA   Cheuk R., Chung M.K., Hayashizaki Y., Ishida J., Kamiya A., Kawai J.,
RA   Kim C., Lin J., Liu S.X., Narusaka M., Pham P.K., Sakano H.,
RA   Sakurai T., Satou M., Seki M., Shinn P., Yamada K., Shinozaki K.,
RA   Ecker J., Theologis A., Davis R.W.;
RL   Submitted (NOV-2001) to the EMBL/GenBank/DDBJ databases.
RN   [9] {ECO:0000313|EMBL:AAM61563.1}
RP   NUCLEOTIDE SEQUENCE.
RX   PubMed=12093376;
RA   Haas B.J., Volfovsky N., Town C.D., Troukhan M., Alexandrov N.,
RA   Feldmann K.A., Flavell R.B., White O., Salzberg S.L.;
RT   "Full-length messenger RNA sequences greatly improve genome
RT   annotation.";
RL   Genome Biol. 3:RESEARCH0029-RESEARCH0029(2002).
RN   [10] {ECO:0000313|EMBL:AAM14141.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Yamada K., Banh J., Chan M.M., Chang C.H., Chang E., Dale J.M.,
RA   Deng J.M., Goldsmith A.D., Lee J.M., Onodera C.S., Quach H.L.,
RA   Tang C., Toriumi M., Wu H.C., Yamamura Y., Yu G., Bowser L.,
RA   Carninci P., Chen H., Cheuk R., Hayashizaki Y., Ishida J., Jones T.,
RA   Kamiya A., Karlin-Neumann G., Kawai J., Kim C., Lam B., Lin J.,
RA   Meyers M.C., Miranda M., Narusaka M., Nguyen M., Palm C.J.,
RA   Sakurai T., Satou M., Seki M., Shinn P., Southwick A., Shinozaki K.,
RA   Davis R.W., Ecker J.R., Theologis A.;
RT   "Arabidopsis Open Reading Frame (ORF) Clones.";
RL   Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN   [11] {ECO:0000313|EMBL:AAM61563.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Brover V., Troukhan M., Alexandrov N., Lu Y.-P., Flavell R.,
RA   Feldmann K.;
RL   Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN   [12] {ECO:0000313|EMBL:AAP21342.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Cheuk R., Chen H., Kim C.J., Shinn P., Bowser L., Carninci P.,
RA   Dale J.M., Hayashizaki Y., Hsuan V.W., Ishida J., Jones T., Kamiya A.,
RA   Karlin-Neumann G., Kawai J., Lam B., Lin J., Miranda M., Narusaka M.,
RA   Nguyen M., Onodera C.S., Palm C.J., Quach H.L., Sakurai T., Satou M.,
RA   Seki M., Southwick A., Toriumi M., Wong C., Wu H.C., Yamada K., Yu G.,
RA   Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.;
RT   "Arabidopsis ORF clones.";
RL   Submitted (APR-2003) to the EMBL/GenBank/DDBJ databases.
RN   [13] {ECO:0000313|EMBL:AAM61563.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Alexandrov N.A., Troukhan M.E., Brover V.V., Flavell R.B.,
RA   Feldmann K.A.;
RT   "Features of Arabidopsis genes and genome discovered using full-length
RT   cDNAs.";
RL   Plant Mol. Biol. 60:71-87(2006).
RN   [14] {ECO:0000313|EMBL:AED90342.1}
RP   NUCLEOTIDE SEQUENCE.
RG   TAIR;
RA   Swarbreck D., Lamesch P., Wilks C., Huala E.;
RL   Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases.
RN   [15] {ECO:0000313|EMBL:AED90342.1, ECO:0000313|Proteomes:UP000006548}
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RG   The Arabidopsis Information Portal (Araport);
RL   Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
RN   [16] {ECO:0000313|EMBL:AEE78540.1, ECO:0000313|Proteomes:UP000006548}
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RA   Lavstsen T., Jespersen J.S.;
RL   Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; AY045875; AAK76549.1; -; mRNA.
DR   EMBL; AY062841; AAL32919.1; -; mRNA.
DR   EMBL; AY091202; AAM14141.1; -; mRNA.
DR   EMBL; AY085005; AAM61563.1; -; mRNA.
DR   EMBL; BT006534; AAP21342.1; -; mRNA.
DR   EMBL; CP002688; AED90342.1; -; Genomic_DNA.
DR   EMBL; CP002688; AED90343.1; -; Genomic_DNA.
DR   EMBL; CP002686; AEE78540.1; -; Genomic_DNA.
DR   EMBL; CP002686; ANM65140.1; -; Genomic_DNA.
DR   EMBL; CP002686; ANM65141.1; -; Genomic_DNA.
DR   EMBL; AL132964; CAB62447.1; -; Genomic_DNA.
DR   EMBL; AL161746; CAB81926.1; -; Genomic_DNA.
DR   PIR; T46220; T46220.
DR   RefSeq; NP_001190200.1; NM_001203271.1.
DR   RefSeq; NP_001327134.1; NM_001339416.1.
DR   RefSeq; NP_001327135.1; NM_001339415.1.
DR   RefSeq; NP_190511.1; NM_114802.3.
DR   RefSeq; NP_195763.1; NM_120221.4.
DR   UniGene; At.48968; -.
DR   UniGene; At.73030; -.
DR   IntAct; Q9SCL4; 5.
DR   STRING; 3702.AT5G01430.1; -.
DR   EnsemblPlants; AT3G49420.1; AT3G49420.1; AT3G49420.
DR   EnsemblPlants; AT3G49420.2; AT3G49420.2; AT3G49420.
DR   EnsemblPlants; AT3G49420.3; AT3G49420.3; AT3G49420.
DR   EnsemblPlants; AT5G01430.1; AT5G01430.1; AT5G01430.
DR   EnsemblPlants; AT5G01430.2; AT5G01430.2; AT5G01430.
DR   GeneID; 824104; -.
DR   GeneID; 831915; -.
DR   Gramene; AT3G49420.1; AT3G49420.1; AT3G49420.
DR   Gramene; AT3G49420.2; AT3G49420.2; AT3G49420.
DR   Gramene; AT3G49420.3; AT3G49420.3; AT3G49420.
DR   Gramene; AT5G01430.1; AT5G01430.1; AT5G01430.
DR   Gramene; AT5G01430.2; AT5G01430.2; AT5G01430.
DR   KEGG; ath:AT3G49420; -.
DR   KEGG; ath:AT5G01430; -.
DR   Araport; AT3G49420; -.
DR   Araport; AT5G01430; -.
DR   TAIR; locus:2114638; AT3G49420.
DR   TAIR; locus:2179167; AT5G01430.
DR   eggNOG; KOG1743; Eukaryota.
DR   eggNOG; COG5120; LUCA.
DR   OMA; FYFFARK; -.
DR   OrthoDB; EOG09360QLB; -.
DR   Proteomes; UP000006548; Chromosome 3.
DR   Proteomes; UP000006548; Chromosome 5.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0016192; P:vesicle-mediated transport; IEA:InterPro.
DR   InterPro; IPR007305; Vesicle_transpt_Got1/SFT2.
DR   Pfam; PF04178; Got1; 1.
PE   2: Evidence at transcript level;
DR   PRODOM; Q9SCL4.
DR   SWISS-2DPAGE; Q9SCL4.
KW   Complete proteome {ECO:0000313|Proteomes:UP000006548};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006548};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     12     32       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     38     57       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     69     87       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     93    111       Helical. {ECO:0000256|SAM:Phobius}.
SQ   SEQUENCE   140 AA;  15986 MW;  2C933AB7DECDA0BD CRC64;
     MMSFEMNDRK KIGLGLTGFG VFFSFLGIVF VFDKGLLAMG NILFISGVSL TIGFKSTMQF
     FMKRQNYKGT ISFGVGFFFV IIGWPILGMM LETYGFFVLF SGFWPTLAVF AQKIPVLGWI
     IQQPYIRSFF DKYRGKRVPV
//

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