(data stored in SCRATCH zone)

SWISSPROT: Q9SZ22_ARATH

ID   Q9SZ22_ARATH            Unreviewed;       242 AA.
AC   Q9SZ22;
DT   01-MAY-2000, integrated into UniProtKB/TrEMBL.
DT   01-MAY-2000, sequence version 1.
DT   11-DEC-2019, entry version 106.
DE   SubName: Full=GrpE-like protein {ECO:0000313|EMBL:AEE85257.1};
GN   OrderedLocusNames=At4g26820 {ECO:0000313|Araport:AT4G26820,
GN   ECO:0000313|EMBL:AEE85257.1};
GN   ORFNames=F10M23.160 {ECO:0000313|EMBL:CAB36528.1}, F10M23_160
GN   {ECO:0000313|EMBL:AEE85257.1};
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702 {ECO:0000313|EMBL:CAB36528.1};
RN   [1] {ECO:0000313|EMBL:AEE85257.1, ECO:0000313|Proteomes:UP000006548}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX   PubMed=10617198; DOI=10.1038/47134;
RG   EU;
RG   CSHL and WU Arabidopsis Sequencing Project;
RA   Mayer K., Schuller C., Wambutt R., Murphy G., Volckaert G., Pohl T.,
RA   Dusterhoft A., Stiekema W., Entian K.D., Terryn N., Harris B., Ansorge W.,
RA   Brandt P., Grivell L., Rieger M., Weichselgartner M., de Simone V.,
RA   Obermaier B., Mache R., Muller M., Kreis M., Delseny M., Puigdomenech P.,
RA   Watson M., Schmidtheini T., Reichert B., Portatelle D., Perez-Alonso M.,
RA   Boutry M., Bancroft I., Vos P., Hoheisel J., Zimmermann W., Wedler H.,
RA   Ridley P., Langham S.A., McCullagh B., Bilham L., Robben J.,
RA   Van der Schueren J., Grymonprez B., Chuang Y.J., Vandenbussche F.,
RA   Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R., Defoor E.,
RA   Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M., Holzer E.,
RA   Brandt A., Peters S., van Staveren M., Dirske W., Mooijman P.,
RA   Klein Lankhorst R., Rose M., Hauf J., Kotter P., Berneiser S., Hempel S.,
RA   Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C.,
RA   Gielen J., Villarroel R., De Clercq R., Van Montagu M., Rogers J.,
RA   Cronin A., Quail M., Bray-Allen S., Clark L., Doggett J., Hall S., Kay M.,
RA   Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A., Lyne M.,
RA   Benes V., Rechmann S., Borkova D., Blocker H., Scharfe M., Grimm M.,
RA   Lohnert T.H., Dose S., de Haan M., Maarse A., Schafer M., Muller-Auer S.,
RA   Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D., Herzl A.,
RA   Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E., Massenet O.,
RA   Quigley F., Clabauld G., Mundlein A., Felber R., Schnabl S., Hiller R.,
RA   Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R., Berger C.,
RA   Montfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M.,
RA   Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E.,
RA   Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P.,
RA   Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K.,
RA   Mewes H.W., Stocker S., Zaccaria P., Bevan M., Wilson R.K.,
RA   de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K.,
RA   Huang E., Spiegel L., Sehkon M., Murray J., Sheet P., Cordes M.,
RA   Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G.,
RA   Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K.,
RA   Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K.,
RA   Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L., Nelson J.,
RA   Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H., Ali J.,
RA   Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B.,
RA   Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J.,
RA   Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K.,
RA   O'Shaughnessy A., Rodriguez M., Hoffmann J., Till S., Granat S., Shohdy N.,
RA   Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.,
RA   Martienssen R., McCombie W.R.;
RT   "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.";
RL   Nature 402:769-777(1999).
RN   [2] {ECO:0000313|EMBL:CAB36528.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Bevan M., Lecharny A., Chefdor F., Krivitzky M., Kreis M., Hoheisel J.,
RA   Mewes H.W., Mayer K.F.X., Schueller C.;
RL   Submitted (FEB-1999) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|EMBL:CAB36528.1}
RP   NUCLEOTIDE SEQUENCE.
RA   EU Arabidopsis sequencing project;
RL   Submitted (MAY-1999) to the EMBL/GenBank/DDBJ databases.
RN   [4] {ECO:0000313|EMBL:CAB79537.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Lecharny A., Chefdor F., Krivitzky M., Kreis M., Mewes H.W., Lemcke K.,
RA   Mayer K.F.X.;
RL   Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases.
RN   [5] {ECO:0000313|EMBL:AEE85257.1}
RP   NUCLEOTIDE SEQUENCE.
RG   TAIR10;
RA   Swarbreck D., Lamesch P., Wilks C., Huala E.;
RL   Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases.
RN   [6] {ECO:0000313|EMBL:AEE85257.1}
RP   GENOME REANNOTATION.
RG   The Arabidopsis Information Portal (Araport);
RL   Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
RN   [7] {ECO:0000313|Proteomes:UP000006548}
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; CP002687; AEE85257.1; -; Genomic_DNA.
DR   EMBL; AL035440; CAB36528.1; -; Genomic_DNA.
DR   EMBL; AL161565; CAB79537.1; -; Genomic_DNA.
DR   PIR; T04805; T04805.
DR   RefSeq; NP_194412.1; NM_118816.2.
DR   STRING; 3702.AT4G26820.1; -.
DR   DNASU; 828789; -.
DR   EnsemblPlants; AT4G26820.1; AT4G26820.1; AT4G26820.
DR   GeneID; 828789; -.
DR   Gramene; AT4G26820.1; AT4G26820.1; AT4G26820.
DR   KEGG; ath:AT4G26820; -.
DR   Araport; AT4G26820; -.
DR   TAIR; locus:2116312; AT4G26820.
DR   HOGENOM; HOG000153568; -.
DR   OMA; MHISFAN; -.
DR   OrthoDB; 1211822at2759; -.
DR   Proteomes; UP000006548; Chromosome 4.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
PE   4: Predicted;
DR   PRODOM; Q9SZ22.
DR   SWISS-2DPAGE; Q9SZ22.
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006548};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        53..73
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
SQ   SEQUENCE   242 AA;  27069 MW;  B8D432C4BAD60D7E CRC64;
     MDDEQNLVEE MNQQLLITVI DTEKVPELRP ISSRSHQESE PANISHWSLL FKLFLAITIM
     GACVAGVTFV ILITPTPPTV HVQSMHISFA NHNLPVWSAT FSIKNPNEKL HVTYENPSVW
     LVHRGKLVST ARADSFWQKG GEKNEVIVKR NETKVIDEEA AWEMEDEVAV TGGVVGLDMV
     FSGRVGFYPG TSALWGEQYM SAVCENVSAK LYNVDDEIYG TNRSVLSFDG RLVCSVRLPK
     YP
//

If you have problems or comments...

PBIL Back to PBIL home page