(data stored in ACNUC9435 zone)

HOGENOM: ACAM1_1_PE1758

ID   ACAM1_1_PE1758                       STANDARD;      PRT;   371 AA.
AC   ACAM1_1_PE1758; B0CDC4;
DT   00-JAN-0000 (Rel. 1, Created)
DT   00-JAN-0000 (Rel. 2, Last sequence update)
DT   00-JAN-0000 (Rel. 3, Last annotation update)
DE   RecName: Full=RNA polymerase sigma factor; (ACAM1_1.PE1758).
GN   Name=rpoD; OrderedLocusNames=AM1_1829;
OS   ACARYOCHLORIS MARINA MBIC11017.
OC   Bacteria; Cyanobacteria; Acaryochloris.
OX   NCBI_TaxID=329726;
RN   [0]
RP   -.;
RG   -.;
RL   -.;
CC   -!- SEQ. DATA ORIGIN: Translated from the HOGENOM CDS ACAM1_1.PE1758.
CC       Acaryochloris marina MBIC11017, complete genome.
CC   -!- ANNOTATIONS ORIGIN:B0CDC4_ACAM1
CC   -!- FUNCTION: Sigma factors are initiation factors that promote the
CC       attachment of RNA polymerase to specific initiation sites and are
CC       then released (By similarity).
CC   -!- SIMILARITY: Belongs to the sigma-70 factor family.
CC   -!- GENE_FAMILY: HOG000270273 [ FAMILY / ALN / TREE ]
DR   UniProtKB/Swiss-Prot; B0CDC4; -.
DR   EMBL; CP000828; ABW26849.1; -; Genomic_DNA.
DR   RefSeq; YP_001516163.1; NC_009925.1.
DR   ProteinModelPortal; B0CDC4; -.
DR   SMR; B0CDC4; 132-206, 293-370.
DR   STRING; B0CDC4; -.
DR   GeneID; 5680645; -.
DR   GenomeReviews; CP000828_GR; AM1_1829.
DR   KEGG; amr:AM1_1829; -.
DR   OMA; SMEMTIE; -.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR   GO; GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
DR   InterPro; IPR014284; RNA_pol_sigma-70.
DR   InterPro; IPR000943; RNA_pol_sigma70.
DR   InterPro; IPR009042; RNA_pol_sigma70_r1_2.
DR   InterPro; IPR007627; RNA_pol_sigma70_r2.
DR   InterPro; IPR007624; RNA_pol_sigma70_r3.
DR   InterPro; IPR007630; RNA_pol_sigma70_r4.
DR   InterPro; IPR013325; RNA_pol_sigma_r2.
DR   InterPro; IPR013324; RNA_pol_sigma_r3_r4.
DR   InterPro; IPR012760; RNA_pol_sigma_RpoD_C.
DR   InterPro; IPR017848; RNA_pol_sigma_RpoD_cyanobac.
DR   InterPro; IPR011991; WHTH_trsnscrt_rep_DNA-bd.
DR   Gene3D; G3DSA:1.10.10.10; Wing_hlx_DNA_bd; 2.
DR   Pfam; PF00140; Sigma70_r1_2; 1.
DR   Pfam; PF04542; Sigma70_r2; 1.
DR   Pfam; PF04539; Sigma70_r3; 1.
DR   Pfam; PF04545; Sigma70_r4; 1.
DR   PRINTS; PR00046; SIGMA70FCT.
DR   SUPFAM; SSF88946; Sigma_r2; 1.
DR   SUPFAM; SSF88659; Sigma_r3_r4; 2.
DR   TIGRFAMs; TIGR02393; RpoD_Cterm; 1.
DR   TIGRFAMs; TIGR02997; Sig70-cyanoRpoD; 1.
DR   TIGRFAMs; TIGR02937; Sigma70-ECF; 1.
DR   PROSITE; PS00715; SIGMA70_1; 1.
DR   PROSITE; PS00716; SIGMA70_2; 1.
DR   HOGENOMDNA; ACAM1_1.PE1758; -.
KW   RNA polymerase sigma-70 factor;
KW   Complete proteome; DNA-binding; Sigma factor; Transcription;
KW   Transcription regulation.
SQ   SEQUENCE   371 AA;  UNKNOWN MW;  UNKNOWN CRC64;
     MTQANNVLEA IQAPANDLDN LVEDAASSTS EDNQAGEGGK TTKARTARRR GQSKKKHYTE
     DSIRLYLQEI GRIRLLRADE EIELARKIAD LLELERIYDD LFDRLEREPQ LQEWALEVDM
     PLNRFRHRLH AGRRAKDKMV QSNLRLVVSI AKKYMNRGLS FQDLIQEGSL GLIRAAEKFD
     HEKGYKFSTY ATWWIRQAIT RAIADQSRTI RLPVHLYETI SRIKKTTKLL SQEMGRKPTE
     EEIATRMEMT IEKLRFIAKS AQLPISLETP IGKEEDSRLG DFIESDGETP EDQVSKSLLR
     EDLETVLDTL SPRERDVLKL RYGLDDGRMK TLEEIGQIFN VTRERIRQIE AKALRKLRHP
     NRNSVLKEYI R
//

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