(data stored in ACNUC7421 zone)

HOGENOM: ACCPU_4_PE3976

ID   ACCPU_4_PE3976                       STANDARD;      PRT;   190 AA.
AC   ACCPU_4_PE3976; C7RNG5;
DT   00-JAN-0000 (Rel. 1, Created)
DT   00-JAN-0000 (Rel. 2, Last sequence update)
DT   00-JAN-0000 (Rel. 3, Last annotation update)
DE   RecName: Full=Ribosome maturation factor rimM; (ACCPU_4.PE3976).
GN   Name=rimM; OrderedLocusNames=CAP2UW1_4109;
OS   CANDIDATUS ACCUMULIBACTER PHOSPHATIS CLADE IIA STR. UW-1.
OC   Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.
OX   NCBI_TaxID=522306;
RN   [0]
RP   -.;
RG   -.;
RL   -.;
CC   -!- SEQ. DATA ORIGIN: Translated from the HOGENOM CDS ACCPU_4.PE3976.
CC       Candidatus Accumulibacter phosphatis clade IIA str. UW-1, complete geno
CC       complete sequence.
CC   -!- ANNOTATIONS ORIGIN:C7RNG5_ACCPU
CC   -!- FUNCTION: An accessory protein needed during the final step in the
CC       assembly of 30S ribosomal subunit, possibly for assembly of the
CC       head region. Probably interacts with S19. Essential for efficient
CC       processing of 16S rRNA. May be needed both before and after rbfA
CC       during the maturation of 16S rRNA. It has affinity for free
CC       ribosomal 30S subunits but not for 70S ribosomes (By similarity).
CC   -!- SUBUNIT: Binds ribosomal protein S19 (By similarity).
CC   -!- SUBCELLULAR LOCATION: Cytoplasm (By similarity).
CC   -!- DOMAIN: The PRC barrel domain binds ribosomal protein S19 (By
CC       similarity).
CC   -!- SIMILARITY: Belongs to the rimM family.
CC   -!- SIMILARITY: Contains 1 PRC barrel domain.
CC   -!- GENE_FAMILY: HOG000220989 [ FAMILY / ALN / TREE ]
DR   UniProtKB/Swiss-Prot; C7RNG5; -.
DR   EMBL; CP001715; ACV37351.1; -; Genomic_DNA.
DR   RefSeq; YP_003169280.1; NC_013194.1.
DR   ProteinModelPortal; C7RNG5; -.
DR   STRING; C7RNG5; -.
DR   GeneID; 8406289; -.
DR   GenomeReviews; CP001715_GR; CAP2UW1_4109.
DR   KEGG; app:CAP2UW1_4109; -.
DR   ProtClustDB; CLSK767171; -.
DR   GO; GO:0005840; C:ribosome; IEA:InterPro.
DR   GO; GO:0043022; F:ribosome binding; IEA:InterPro.
DR   GO; GO:0042274; P:ribosomal small subunit biogenesis; IEA:HAMAP.
DR   GO; GO:0006364; P:rRNA processing; IEA:InterPro.
DR   HAMAP; MF_00014; Ribosome_mat_RimM; 1; -.
DR   InterPro; IPR011961; 16S_RimM.
DR   InterPro; IPR007903; PRC_barrel.
DR   InterPro; IPR011033; PRC_barrell-like.
DR   InterPro; IPR002676; RimM.
DR   InterPro; IPR009000; Transl_elong_init/rib_B-barrel.
DR   Gene3D; G3DSA:2.40.30.60; G3DSA:2.40.30.60; 1.
DR   Pfam; PF05239; PRC; 1.
DR   Pfam; PF01782; RimM; 1.
DR   SUPFAM; SSF50346; PRCH_cytoplasmic; 1.
DR   SUPFAM; SSF50447; Translat_factor; 1.
DR   TIGRFAMs; TIGR02273; 16S_RimM; 1.
DR   HOGENOMDNA; ACCPU_4.PE3976; -.
KW   16S rRNA processing protein RimM;
KW   Chaperone; Complete proteome; Cytoplasm; Ribosome biogenesis.
SQ   SEQUENCE   190 AA;  UNKNOWN MW;  UNKNOWN CRC64;
     MSPSSLVDAA ASAVAADDAP ADIIVLGKIV APYGVQGALR VCPFADDPSG WSRLTHWWLA
     SEGDAPEAWQ QTRLLKCRLH NDMLIAELAG VVDRTAAEAS CGKLVGVPRA ALPPTAAGEY
     YWADLVGLAV INSRGESLGR IIGLLDTPAN AVMRVGDGQQ GERLLPFVAA VVLAVDLPGR
     FVRVDWELDW
//

If you have problems or comments...

PBIL Back to PBIL home page