(data stored in ACNUC7421 zone)

HOGENOM: AGRVS_6_PE2104

ID   AGRVS_6_PE2104                       STANDARD;      PRT;   673 AA.
AC   AGRVS_6_PE2104; B9JY37;
DT   00-JAN-0000 (Rel. 1, Created)
DT   00-JAN-0000 (Rel. 2, Last sequence update)
DT   00-JAN-0000 (Rel. 3, Last annotation update)
DE   SubName: Full=Cold-shock dead-box protein A; (AGRVS_6.PE2104).
GN   Name=deaD; OrderedLocusNames=Avi_2871;
OS   AGROBACTERIUM VITIS S4.
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae;
OC   Rhizobium/Agrobacterium group; Agrobacterium.
OX   NCBI_TaxID=311402;
RN   [0]
RP   -.;
RG   -.;
RL   -.;
CC   -!- SEQ. DATA ORIGIN: Translated from the HOGENOM CDS AGRVS_6.PE2104.
CC       Agrobacterium vitis S4 chromosome 1, complete genome.
CC       sequence.
CC   -!- ANNOTATIONS ORIGIN:B9JY37_AGRVS
CC   -!- SIMILARITY: Belongs to the DEAD box helicase family.
CC   -!- GENE_FAMILY: HOG000268794 [ FAMILY / ALN / TREE ]
DR   UniProtKB/Swiss-Prot; B9JY37; -.
DR   EMBL; CP000633; ACM37067.1; -; Genomic_DNA.
DR   RefSeq; YP_002550076.1; NC_011989.1.
DR   STRING; B9JY37; -.
DR   GeneID; 7385982; -.
DR   GenomeReviews; CP000633_GR; Avi_2871.
DR   KEGG; avi:Avi_2871; -.
DR   OMA; MQHRSGR; -.
DR   ProtClustDB; CLSK864029; -.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   InterPro; IPR005580; DbpA_RNA-bd.
DR   InterPro; IPR014001; DEAD-like_helicase.
DR   InterPro; IPR011545; DNA/RNA_helicase_DEAD/DEAH_N.
DR   InterPro; IPR001650; Helicase_C.
DR   InterPro; IPR000629; RNA-helicase_DEAD-box_CS.
DR   InterPro; IPR014014; RNA_helicase_DEAD_Q_motif.
DR   Pfam; PF03880; DbpA; 1.
DR   Pfam; PF00270; DEAD; 1.
DR   Pfam; PF00271; Helicase_C; 1.
DR   SMART; SM00487; DEXDc; 1.
DR   SMART; SM00490; HELICc; 1.
DR   PROSITE; PS00039; DEAD_ATP_HELICASE; 1.
DR   PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR   PROSITE; PS51194; HELICASE_CTER; 1.
DR   PROSITE; PS51195; Q_MOTIF; 1.
DR   HOGENOMDNA; AGRVS_6.PE2104; -.
KW   cold-shock dead-box protein A;
KW   ATP-binding; Complete proteome; Helicase; Hydrolase;
KW   Nucleotide-binding.
SQ   SEQUENCE   673 AA;  UNKNOWN MW;  UNKNOWN CRC64;
     MTDYDGIVPA IAEALRKRGY ATLTPVQQAM IDTDLEGRDA LVSAQTGSGK TVAFGLALAP
     TLLGSENRFG RAVKPLALCI APTRELALQV QRELEWLYEN TGAIFATCVG GMDIRNERRA
     LERGAHIIVG TPGRLRDHIT RRALDLSGLR AVVMDEADEM LDLGFREDLE FILKESPDER
     RTLMFSATVP RSIADLARSY QRDAKRIETV SEQKQHIDIE YRAMLTVPAD KENAIINALR
     FYEARNAIVF CSTRANVNHL TARLHNRGFS VVALSGELSQ SERTHALQAM RDGRARVCVA
     TDVAARGIDL PGLELVIHAD LPTNSETLLH RSGRTGRAGN KGVSALIVPM SQRRKAERIL
     GGANVQAAWV KPPSADEVIA RDDERLLADP VFSEAISEEE AATIARLLEA HGADKITAAY
     LRAYRSTRSA PEDLMEVKIQ AERPRRENDT YEPNTPSRPR SEFGPSVWFS LSVGRRQSAE
     PRWLIPMLCR NGNITKNEIG AIKMQPEETF VEIAQANLEQ FLTALGPNKT LERGIIVKQL
     PGMPDFNAPP KERAARPPRD DSDFAERKPR AAQGDKKPYA AKAEATERRP YKDDLAKADD
     DVWGNPKPAS SFKKKSNAAG DSRSWDKPKA DWAGKSDKPA YAGKGEKPAY AGKPKGKFEG
     PAGGAKKSFK PKG
//

If you have problems or comments...

PBIL Back to PBIL home page