(data stored in SCRATCH zone)

HOGENOM: ALKMQ_1_PE10

ID   ALKMQ_1_PE10                         STANDARD;      PRT;   266 AA.
AC   ALKMQ_1_PE10; A6TJ85;
DT   00-JAN-0000 (Rel. 1, Created)
DT   00-JAN-0000 (Rel. 2, Last sequence update)
DT   00-JAN-0000 (Rel. 3, Last annotation update)
DE   SubName: Full=Phage transcriptional regulator, RinA family;
DE   (ALKMQ_1.PE10).
GN   OrderedLocusNames=Amet_0010;
OS   ALKALIPHILUS METALLIREDIGENS QYMF.
OC   Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
OC   Alkaliphilus.
OX   NCBI_TaxID=293826;
RN   [0]
RP   -.;
RG   -.;
RL   -.;
CC   -!- SEQ. DATA ORIGIN: Translated from the HOGENOM CDS ALKMQ_1.PE10.
CC       Alkaliphilus metalliredigens QYMF, complete genome.
CC       pAACI03, complete sequence.
CC   -!- ANNOTATIONS ORIGIN:A6TJ85_ALKMQ
CC   -!- GENE_FAMILY: HOG000270270 [ FAMILY / ALN / TREE ]
DR   UniProtKB/Swiss-Prot; A6TJ85; -.
DR   EMBL; CP000724; ABR46253.1; -; Genomic_DNA.
DR   RefSeq; YP_001317912.1; NC_009633.1.
DR   ProteinModelPortal; A6TJ85; -.
DR   STRING; A6TJ85; -.
DR   GeneID; 5310036; -.
DR   GenomeReviews; CP000724_GR; Amet_0010.
DR   KEGG; amt:Amet_0010; -.
DR   eggNOG; COG1191; -.
DR   OMA; SEPMEDI; -.
DR   ProtClustDB; CLSK965190; -.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR   GO; GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
DR   InterPro; IPR014284; RNA_pol_sigma-70.
DR   InterPro; IPR014322; RNA_pol_sigma-B/F/G.
DR   InterPro; IPR000943; RNA_pol_sigma70.
DR   InterPro; IPR007627; RNA_pol_sigma70_r2.
DR   InterPro; IPR007624; RNA_pol_sigma70_r3.
DR   InterPro; IPR007630; RNA_pol_sigma70_r4.
DR   InterPro; IPR013325; RNA_pol_sigma_r2.
DR   InterPro; IPR013324; RNA_pol_sigma_r3_r4.
DR   InterPro; IPR011991; WHTH_trsnscrt_rep_DNA-bd.
DR   Gene3D; G3DSA:1.10.10.10; Wing_hlx_DNA_bd; 2.
DR   Pfam; PF04542; Sigma70_r2; 1.
DR   Pfam; PF04539; Sigma70_r3; 1.
DR   Pfam; PF04545; Sigma70_r4; 1.
DR   PRINTS; PR00046; SIGMA70FCT.
DR   SUPFAM; SSF88946; Sigma_r2; 1.
DR   SUPFAM; SSF88659; Sigma_r3_r4; 2.
DR   TIGRFAMs; TIGR02980; SigBFG; 1.
DR   TIGRFAMs; TIGR02937; Sigma70-ECF; 1.
DR   HOGENOMDNA; ALKMQ_1.PE10; -.
KW   RinA family phage transcriptional regulator;
KW   Complete proteome; DNA-binding; Sigma factor; Transcription;
KW   Transcription regulation.
SQ   SEQUENCE   266 AA;  UNKNOWN MW;  UNKNOWN CRC64;
     MKNIARANKM ALNRDHSLMH LTEKELFIEY QENKKVEVRN ELVNRYLYIA EILSKKFLNK
     GIDYEDIYQV ASLGLIYAIE RFDLSRGFEF SSFATPTIIG EIKKHFRDKG WSIRVPRRIQ
     ELSKKVNTAK MTLHQNLQRT PMIKDIAEYL NCTQEEVMEA MEASQVYTPK SLDLTYDNDG
     EDKDIQLIDL IGEKDKNFDE IENRDFLKKA MRNLNEVEKK VLEDRFFNSK TQMNVAEELN
     VSQMTVSRME KRIIEKFRKE LNKSME
//

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