(data stored in ACNUC7421 zone)

HOGENOM: ALKOO_1_PE10

ID   ALKOO_1_PE10                         STANDARD;      PRT;   270 AA.
AC   ALKOO_1_PE10; A8MEA9;
DT   00-JAN-0000 (Rel. 1, Created)
DT   00-JAN-0000 (Rel. 2, Last sequence update)
DT   00-JAN-0000 (Rel. 3, Last annotation update)
DE   SubName: Full=RNA polymerase, sigma 28 subunit, FliA/WhiG family;
DE   (ALKOO_1.PE10).
GN   OrderedLocusNames=Clos_0010;
OS   ALKALIPHILUS OREMLANDII OHILAS.
OC   Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
OC   Alkaliphilus.
OX   NCBI_TaxID=350688;
RN   [0]
RP   -.;
RG   -.;
RL   -.;
CC   -!- SEQ. DATA ORIGIN: Translated from the HOGENOM CDS ALKOO_1.PE10.
CC       Alkaliphilus oremlandii OhILAs, complete genome.
CC       pAACI03, complete sequence.
CC   -!- ANNOTATIONS ORIGIN:A8MEA9_ALKOO
CC   -!- GENE_FAMILY: HOG000270270 [ FAMILY / ALN / TREE ]
DR   UniProtKB/Swiss-Prot; A8MEA9; -.
DR   EMBL; CP000853; ABW17580.1; -; Genomic_DNA.
DR   RefSeq; YP_001511576.1; NC_009922.1.
DR   ProteinModelPortal; A8MEA9; -.
DR   STRING; A8MEA9; -.
DR   GeneID; 5676475; -.
DR   GenomeReviews; CP000853_GR; Clos_0010.
DR   KEGG; aoe:Clos_0010; -.
DR   OMA; MFRELAE; -.
DR   ProtClustDB; CLSK965190; -.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR   GO; GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
DR   InterPro; IPR014284; RNA_pol_sigma-70.
DR   InterPro; IPR014322; RNA_pol_sigma-B/F/G.
DR   InterPro; IPR000943; RNA_pol_sigma70.
DR   InterPro; IPR007627; RNA_pol_sigma70_r2.
DR   InterPro; IPR007624; RNA_pol_sigma70_r3.
DR   InterPro; IPR007630; RNA_pol_sigma70_r4.
DR   InterPro; IPR013325; RNA_pol_sigma_r2.
DR   InterPro; IPR013324; RNA_pol_sigma_r3_r4.
DR   InterPro; IPR011991; WHTH_trsnscrt_rep_DNA-bd.
DR   Gene3D; G3DSA:1.10.10.10; Wing_hlx_DNA_bd; 2.
DR   Pfam; PF04542; Sigma70_r2; 1.
DR   Pfam; PF04539; Sigma70_r3; 1.
DR   Pfam; PF04545; Sigma70_r4; 1.
DR   PRINTS; PR00046; SIGMA70FCT.
DR   SUPFAM; SSF88946; Sigma_r2; 1.
DR   SUPFAM; SSF88659; Sigma_r3_r4; 2.
DR   TIGRFAMs; TIGR02980; SigBFG; 1.
DR   TIGRFAMs; TIGR02937; Sigma70-ECF; 1.
DR   HOGENOMDNA; ALKOO_1.PE10; -.
KW   FliA/WhiG family RNA polymerase sigma factor;
KW   Complete proteome; DNA-binding; Sigma factor; Transcription;
KW   Transcription regulation.
SQ   SEQUENCE   270 AA;  UNKNOWN MW;  UNKNOWN CRC64;
     MANIANSTEA DDYMIMNKSK KEKNLTEKEL FKEYALTRDI EIRNELINRH LYIAEILSKK
     FLNKGIEYED IYQVASLGLI YAIERYDVTK GFEFSSFATP TIIGEIKKYF RDKGWSIRVP
     RRIQELSKKV NVSKNTLQQT LQRTPTVKDI AEYLNCTEEE VIEAMEASQV YTPKSLDLIY
     DNDGDDKDIQ LLDLIGELDK RFDDIENKDF FQKAIDKLNE VEKKVLKDRF FNNKTQMKVS
     EELNVSQMTV SRMEKRIIEK FKKELDRSME
//

If you have problems or comments...

PBIL Back to PBIL home page