(data stored in ACNUC9543 zone)

HOGENOM: ARATH_3_PE3585

ID   ARATH_3_PE3585                       STANDARD;      PRT;   1168 AA.
AC   ARATH_3_PE3585; Q38953; Q9LRV0;
DT   00-JAN-0000 (Rel. 1, Created)
DT   00-JAN-0000 (Rel. 2, Last sequence update)
DT   00-JAN-0000 (Rel. 3, Last annotation update)
DE   RecName: Full=Probable pre-mRNA-splicing factor ATP-dependent RNA
DE   helicase; EC=3.6.4 13; (ARATH_3.PE3585).
GN   OrderedLocusNames=At3g26560; ORFNames=MFE16.8;
OS   ARABIDOPSIS THALIANA.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicots; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [0]
RP   -.;
RG   -.;
RL   -.;
CC   -!- SEQ. DATA ORIGIN: Translated from the HOGENOM CDS ARATH_3.PE3585.
CC       Arabidopsis thaliana chromosome 3 TAIR10 full sequence 1..23459830
CC       annotated by Ensembl Genomes
CC   -!- ANNOTATIONS ORIGIN:DHX8_ARATH
CC   -!- FUNCTION: Could act late in the splicing of pre-mRNA and mediate
CC       the release of the spliced mRNA from spliceosomes (By similarity).
CC   -!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate.
CC   -!- SUBCELLULAR LOCATION: Nucleus.
CC   -!- SIMILARITY: Belongs to the DEAD box helicase family. DEAH
CC       subfamily. DDX8/PRP22 sub-subfamily.
CC   -!- SIMILARITY: Contains 1 helicase ATP-binding domain.
CC   -!- SIMILARITY: Contains 1 helicase C-terminal domain.
CC   -!- SIMILARITY: Contains 1 S1 motif domain.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=CAA66613.1; Type=Frameshift; Positions=57;
CC       Sequence=CAA66825.1; Type=Frameshift; Positions=57;
CC   -!- GENE_FAMILY: HOG000175261 [ FAMILY / ALN / TREE ]
DR   HOGENOM:Arabidopsis_thaliana;AT3G26560;AT3G26560.1;AT3G26560.1.
DR   EMBL; AB028611; - ;
DR   EMBL; AK222021; - ;
DR   EMBL; AK226989; - ;
DR   EMBL; AK228850; - ;
DR   EMBL; AK230289; - ;
DR   EMBL; X97970; - ;
DR   EMBL; X98130; - ;
DR   UniProtKB/Swiss-Prot; Q38953; Q9LRV0; -.
DR   EMBL; X98130; CAA66825.1; ALT_FRAME; Genomic_DNA.
DR   EMBL; X97970; CAA66613.1; ALT_FRAME; mRNA.
DR   EMBL; AB028611; BAB01838.1; -; Genomic_DNA.
DR   EMBL; CP002686; AEE77178.1; -; Genomic_DNA.
DR   IPI; IPI00530246; -.
DR   RefSeq; NP_189288.1; NM_113564.3.
DR   UniGene; At.46918; -.
DR   ProteinModelPortal; Q38953; -.
DR   SMR; Q38953; 208-299, 506-1155.
DR   STRING; Q38953; -.
DR   PRIDE; Q38953; -.
DR   EnsemblPlants; AT3G26560.1; AT3G26560.1; AT3G26560.
DR   GeneID; 822264; -.
DR   GenomeReviews; BA000014_GR; AT3G26560.
DR   KEGG; ath:AT3G26560; -.
DR   NMPDR; fig|3702.1.peg.14930; -.
DR   GeneFarm; 1800; 135.
DR   TAIR; At3g26560; -.
DR   InParanoid; Q38953; -.
DR   OMA; KTMGIND; -.
DR   PhylomeDB; Q38953; -.
DR   ProtClustDB; CLSN2684863; -.
DR   ArrayExpress; Q38953; -.
DR   Genevestigator; Q38953; -.
DR   GermOnline; AT3G26560; Arabidopsis thaliana.
DR   GO; GO:0005829; C:cytosol; IDA:TAIR.
DR   GO; GO:0005739; C:mitochondrion; IDA:TAIR.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.
DR   GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR   GO; GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
DR   GO; GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
DR   InterPro; IPR014001; DEAD-like_helicase.
DR   InterPro; IPR011545; DNA/RNA_helicase_DEAD/DEAH_N.
DR   InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS.
DR   InterPro; IPR011709; DUF1605.
DR   InterPro; IPR007502; Helicase-assoc_dom.
DR   InterPro; IPR001650; Helicase_C.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR016027; NA-bd_OB-fold-like.
DR   InterPro; IPR003029; Rbsml_prot_S1_RNA-bd_dom.
DR   InterPro; IPR022967; RNA-binding_domain_S1.
DR   Gene3D; G3DSA:2.40.50.140; OB_NA_bd_sub; 1.
DR   Pfam; PF00270; DEAD; 1.
DR   Pfam; PF04408; HA2; 1.
DR   Pfam; PF00271; Helicase_C; 1.
DR   Pfam; PF07717; OB_NTP_bind; 1.
DR   Pfam; PF00575; S1; 1.
DR   SMART; SM00487; DEXDc; 1.
DR   SMART; SM00847; HA2; 1.
DR   SMART; SM00490; HELICc; 1.
DR   SMART; SM00316; S1; 1.
DR   SUPFAM; SSF50249; Nucleic_acid_OB; 1.
DR   PROSITE; PS00690; DEAH_ATP_HELICASE; 1.
DR   PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR   PROSITE; PS51194; HELICASE_CTER; 1.
DR   PROSITE; PS50126; S1; 1.
DR   HOGENOMDNA; ARATH_3.PE3585; -.
KW   AT3G26560pg.C_scaffold_1320000031; AT3G26560.1.C_scaffold_1320000031;
KW   Q0WLB6; Q0WUZ2; Q56WL7; AB028611; AK222021; AK226989; AK228850; AK230289;
KW   X98130;
KW   ATP-binding; Complete proteome; Helicase; Hydrolase; mRNA processing;
KW   mRNA splicing; Nucleotide-binding; Nucleus; Phosphoprotein;
KW   Reference proteome.
SQ   SEQUENCE   1168 AA;  UNKNOWN MW;  UNKNOWN CRC64;
     MEKEELNKLN HLSLVSNVCN ELETHLGSAE KVLAEFIIDL GRHSETVDEF DKNLKEAGAE
     MPDYFVRSLL TTIHGIYPPK PKSEKKKEEG DDQKFKGLAI KDTKDKVKEL EKEIEREAEE
     RRREEDRNRD RDRRESGRDR DRDRNRDRDD RRDRHRDRER NRGDEEGEDR RSDRRHRERG
     RGDGGEGEDR RRDRRAKDEY VEEDKGGANE PELYQVYKGR VTRVMDAGCF VQFDKFRGKE
     GLVHVSQMAT RRVDKAKEFV KRDMEVYVKV ISISSDKYSL SMRDVDQNTG RDLIPLRKPS
     DEDDSSRSNP SYRTKDGQVT KTGISGIRIV EENDVAPSRR PLKKMSSPER WEAKQLIASG
     VLRVDEFPMY DEDGDGMLYQ EEGAEEELEI EMNEDEPAFL QGQTRYSVDM SPVKIFKNPE
     GSLSRAAALQ SALTKERREM REQQQRTMLD SIPKDLNRPW EDPMPETGER HLAQELRGVG
     LSAYDMPEWK KDAFGKTPTF GQRSKLSIQE QRESLPIYKL KKELIQAVHD NQVLVVIGET
     GSGKTTQVTQ YLAEAGYTTK GKIGCTQPRR VAAMSVAKRV AEEFGCRLGE EVGYAIRFED
     CTGPDTVIKY MTDGMLLREI LIDENLSQYS VIMLDEAHER TIHTDVLFGL LKKLMKRRLD
     LRLIVTSATL DAEKFSGYFF NCNIFTIPGR TFPVEILYTK QPETDYLDAA LITVLQIHLT
     EPEGDILVFL TGQEEIDSAC QSLYERMKGL GKNVPELIIL PVYSALPSEM QSRIFDPPPP
     GKRKVVVATN IAEASLTIDG IYYVVDPGFA KQNVYNPKQG LESLVITPIS QASAKQRAGR
     AGRTGPGKCY RLYTESAYRN EMPPTSIPEI QRINLGMTTL TMKAMGINDL LSFDFMDPPQ
     PQALISAMEQ LYSLGALDEE GLLTKLGRKM AEFPLEPPLS KMLLASVDLG CSDEILTMIA
     MIQTGNIFYR PREKQAQADQ KRAKFFQPEG DHLTLLAVYE AWKAKNFSGP WCFENFIQSR
     SLRRAQDVRK QLLSIMDKYK LDVVTAGKNF TKIRKAITAG FFFHGARKDP QEGYRTLVEN
     QPVYIHPSSA LFQRQPDWVI YHDLVMTTKE YMREVTVIDP KWLVELAPRF FKVSDPTKMS
     KRKRQERIEP LYDRYHEPNS WRLSKRRA
//

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