(data stored in SCRATCH zone)

HOGENOM: ARATH_4_PE3374

ID   ARATH_4_PE3374                       STANDARD;      PRT;   59 AA.
AC   ARATH_4_PE3374; Q9STQ3;
DT   00-JAN-0000 (Rel. 1, Created)
DT   00-JAN-0000 (Rel. 2, Last sequence update)
DT   00-JAN-0000 (Rel. 3, Last annotation update)
DE   RecName: Full=Arabinogalactan peptide 13; Short=AG-peptide 13;Flags:
DE   Precursor; (ARATH_4.PE3374).
GN   Name=AGP13; OrderedLocusNames=At4g26320; ORFNames=T25K17.130;
OS   ARABIDOPSIS THALIANA.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicots; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [0]
RP   -.;
RG   -.;
RL   -.;
CC   -!- SEQ. DATA ORIGIN: Translated from the HOGENOM CDS ARATH_4.PE3374.
CC       Arabidopsis thaliana chromosome 4 TAIR10 full sequence 1..18585056
CC       annotated by Ensembl Genomes
CC   -!- ANNOTATIONS ORIGIN:AGP13_ARATH
CC   -!- FUNCTION: Proteoglycan that seems to be implicated in diverse
CC       developmental roles such as differentiation, cell-cell
CC       recognition, embryogenesis and programmed cell death.
CC   -!- SUBCELLULAR LOCATION: Cell membrane; Lipid-anchor, GPI-anchor
CC       (Potential).
CC   -!- PTM: O-glycosylation with arabinogalactan occurs on noncontiguous
CC       hydroxyproline residues.
CC   -!- SIMILARITY: Belongs to the AG-peptide AGP family.
CC   -!- GENE_FAMILY: HOG000029117 [ FAMILY / ALN / TREE ]
DR   HOGENOM:Arabidopsis_thaliana;AT4G26320;AT4G26320.1;AT4G26320.1.
DR   EMBL; AF195894; - ;
DR   EMBL; AL049171; - ;
DR   EMBL; AL161565; - ;
DR   EMBL; BT024797; - ;
DR   UniProtKB/Swiss-Prot; Q9STQ3; -.
DR   EMBL; AF195894; AAG24281.1; -; mRNA.
DR   EMBL; AL049171; CAB38961.1; -; Genomic_DNA.
DR   EMBL; AL161565; CAB79487.1; -; Genomic_DNA.
DR   EMBL; CP002687; AEE85185.1; -; Genomic_DNA.
DR   EMBL; BT024797; ABD60680.1; -; mRNA.
DR   IPI; IPI00542421; -.
DR   PIR; T06016; T06016.
DR   RefSeq; NP_194362.1; NM_118765.2.
DR   UniGene; At.23354; -.
DR   EnsemblPlants; AT4G26320.1; AT4G26320.1; AT4G26320.
DR   GeneID; 828738; -.
DR   GenomeReviews; CT486007_GR; AT4G26320.
DR   KEGG; ath:AT4G26320; -.
DR   NMPDR; fig|3702.1.peg.20554; -.
DR   GeneFarm; 1482; 0.
DR   TAIR; At4g26320; -.
DR   GeneTree; EPGT00050000018393; -.
DR   InParanoid; Q9STQ3; -.
DR   OMA; MEAMKMR; -.
DR   ProtClustDB; CLSN2688348; -.
DR   ArrayExpress; Q9STQ3; -.
DR   Genevestigator; Q9STQ3; -.
DR   GO; GO:0031225; C:anchored to membrane; TAS:TAIR.
DR   GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR   HOGENOMDNA; ARATH_4.PE3374; -.
KW   AT4G26320pg.C_scaffold_1320000031; AT4G26320.1.C_scaffold_1320000031;
KW   AF195894; AL049171; AL161565; BT024797;
KW   Cell membrane; Complete proteome; Direct protein sequencing;
KW   Glycoprotein; GPI-anchor; Hydroxylation; Lipoprotein; Membrane;
KW   Proteoglycan; Reference proteome; Signal.
SQ   SEQUENCE   59 AA;  UNKNOWN MW;  UNKNOWN CRC64;
     MEAMKMRLFV AVLVAAMAFS AVQQAAAVEA PAPSPTSDAS LAIPAFFASV ATLAFGFLF
//

If you have problems or comments...

PBIL Back to PBIL home page