(data stored in ACNUC11299 zone)

HOGENOM: ASPFC_1_PE1393

ID   ASPFC_1_PE1393                       STANDARD;      PRT;   1750 AA.
AC   ASPFC_1_PE1393; B0XMU6;
DT   00-JAN-0000 (Rel. 1, Created)
DT   00-JAN-0000 (Rel. 2, Last sequence update)
DT   00-JAN-0000 (Rel. 3, Last annotation update)
DE   RecName: Full=DNA-directed RNA polymerase; EC=2.7.7 6; (ASPFC_1.PE1393).
GN   ORFNames=AFUB_014220;
OS   ASPERGILLUS FUMIGATUS A1163.
OC   Eukaryota; Fungi; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiales;
OC   Trichocomaceae; mitosporic Trichocomaceae; Aspergillus.
OX   NCBI_TaxID=451804;
RN   [0]
RP   -.;
RG   -.;
RL   -.;
CC   -!- SEQ. DATA ORIGIN: Translated from the HOGENOM CDS ASPFC_1.PE1393.
CC       Aspergillus fumigatusa1163 scaffold DS499594 CADRE full sequence 1..489
CC       annotated by Ensembl Genomes
CC   -!- ANNOTATIONS ORIGIN:B0XMU6_ASPFC
CC   -!- CATALYTIC ACTIVITY: Nucleoside triphosphate + RNA(n) = diphosphate
CC       + RNA(n+1).
CC   -!- SIMILARITY: Belongs to the RNA polymerase beta' chain family.
CC   -!- GENE_FAMILY: HOG000222975 [ FAMILY / ALN / TREE ]
DR   HOGENOM:Aspergillus_fumigatusa1163;CADAFUBG00001427;CADAFUBT00001427;CADAFUBP00001393.
DR   EMBL; DS499594; - ;
DR   UniProtKB/Swiss-Prot; B0XMU6; -.
DR   EMBL; DS499594; EDP56703.1; -; Genomic_DNA.
DR   EnsemblFungi; CADAFUBT00001427; CADAFUBP00001393; CADAFUBG00001427.
DR   GeneTree; EFGT00050000000243; -.
DR   GO; GO:0005665; C:DNA-directed RNA polymerase II, core complex; IEA:InterPro.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
DR   GO; GO:0006366; P:transcription from RNA polymerase II promoter; IEA:InterPro.
DR   InterPro; IPR000722; RNA_pol_asu.
DR   InterPro; IPR000684; RNA_pol_II_repeat_euk.
DR   InterPro; IPR006592; RNA_pol_N.
DR   InterPro; IPR007080; RNA_pol_Rpb1_1.
DR   InterPro; IPR007066; RNA_pol_Rpb1_3.
DR   InterPro; IPR007083; RNA_pol_Rpb1_4.
DR   InterPro; IPR007081; RNA_pol_Rpb1_5.
DR   InterPro; IPR007075; RNA_pol_Rpb1_6.
DR   InterPro; IPR007073; RNA_pol_Rpb1_7.
DR   Pfam; PF04997; RNA_pol_Rpb1_1; 1.
DR   Pfam; PF00623; RNA_pol_Rpb1_2; 1.
DR   Pfam; PF04983; RNA_pol_Rpb1_3; 1.
DR   Pfam; PF05000; RNA_pol_Rpb1_4; 1.
DR   Pfam; PF04998; RNA_pol_Rpb1_5; 1.
DR   Pfam; PF04992; RNA_pol_Rpb1_6; 1.
DR   Pfam; PF04990; RNA_pol_Rpb1_7; 1.
DR   Pfam; PF05001; RNA_pol_Rpb1_R; 8.
DR   SMART; SM00663; RPOLA_N; 1.
DR   PROSITE; PS00115; RNA_POL_II_REPEAT; 5.
DR   HOGENOMDNA; ASPFC_1.PE1393; -.
KW   CADAFUBG00001427affold_1320000031; CADAFUBP00001393affold_1320000031;
KW   DS499594;
KW   Complete proteome; DNA-directed RNA polymerase;
KW   Nucleotidyltransferase; Transcription; Transferase.
SQ   SEQUENCE   1750 AA;  UNKNOWN MW;  UNKNOWN CRC64;
     MSNVYFPYSK APLRTIKEIQ FGLFSPEEIK RMSVVHVEYP ETMDEQRMRP RTKGLNDPRL
     GTIDRQWNCE TCEEGQKECP GHFGHIELAT PVFHIGFLTK VKKLLETVCH NCGKIKADTS
     DSKFLEALRM RDPKRRFDHI WRLSKDVLIC EADPPPDEDE PFSKESSKPL RRHGGCGNAQ
     PTIRKEGITL VGTWKPNKSM MDEDEMQQPE KKVITPQMAL NVFRNISHED VRIMGLSNDY
     ARPEWMIITV LPVPPPPVRP SVLVGGSTSG QRGEDDLTYK LAEIIRANQN VQRCEQEGAP
     EHVVREFESL LQYHVATYMD NDIAGQPKAM QKSNRPVKAI RSRLKGKEGR LRQNLMGKRV
     DFSARTVITG DPNLSLDEVG VPRSIARTLT YPEVVTPYNI EKLQQLVANG PNEHPGARYI
     VRDNGERIDL RHARRAGGQQ LLYGWKVERH LMDGDIILFN RQPSLHKESM MGHRVRVMPY
     STFRLNLSVT TPYNADFDGD EMNLHVPQSE ESRAELKQLA LVPLNIVSPQ RNGPLMGIVQ
     DTLCGIYKIC RRDVFLTKEQ VMNIMLWVPD WDGVIPPPAI LKPRPRWTGK QMISMALPSG
     LNLLRVEKDN SSLAEKFSPL TDGGLLIHGG QLMYGMFSKK TVGASGGGVI HTIFNEYGPD
     TAVAFFNGAQ TIVNYWLLHN GFSIGIGDTI PDAITIQRIE NCVRERKKEV EAITASATEN
     TLEPLPGMNV RETFESKVSR ALNNARDEAG SETEKSLKDL NNAIQMARSG SKGSTINISQ
     MTAVVGQQSV EGKRIPFGFK YRTLPHFTKD DYSPESRGFV ENSYLRGLTP TEFFFHAMAG
     REGLIDTAVK TAETGYIQRK LVKALEEVMV KYDGTVRNSL GDVIQFIYGE DGLDGAHIEN
     QRVDVIRCSD EKFRERFRVD LMDPERSLGP EVLEQANEIA GDVEVQRYLD EEWEQLLKDR
     AFLRTVAKED DEMMQLPINV QRILETARST FRIREGAISD LHPAEVIPQV RSLLDRLLVV
     RGDDPISREA QENATMLFKA QLRSRLAFRR LVTEYSMNKL AFQHVLGAIE SRFAKAAANP
     GEMVGVLAAQ SIGEPATQMT LNTFHFAGVS SKNVTLGVPR LKEILNVATN IKTPSMTVYQ
     LPHRCHDKES AKQLRSVVEH TSLRSVTEAT EIYYDPDIQT TVIENDRDMV ESYFIIPEDV
     TDATSRQSKW LLRIILSRPK LLDKGLTVQD VAAKIKQAYP KDIAVIFSDN NADEQVIRIR
     QIQDYKEDED DEDIEYDVTL KKLEQHLLDT LTLRGVQGVE RAFINEKSKV RVLEDGSLFA
     SKTDPLCKEW VLETSGSSLG EVLAVPGVDA TRTYSNQFIE VFEVFGIEAA RTAVLRELTQ
     VLAFDGSYVN HRHLALLVDV MTVRGYLTPV TRHGINRADN GALMRCSFEE TVEILLEAAA
     FGELDDCRGV SENLILGQMA PAGTGEFDLY LDQNLLNTVV SNNARFGVMG TIGAKDAIIS
     DGAATQYDTG SPMQESAFIG TPDPESAFSP IRQAGAESPG GFTEYQPTGG FGGGFSPAAT
     SPAGYSPSSP FSANPTSPGY SPTSSYSPTS PGMGITSPRF MTSPGFSPAS PSFAPTSPAY
     SPTSPAYGQA SPTSPSYSPT SPGFSPTSPN YSPTSPSFSP ASPAFSPTSP SYSPTSPAIG
     GAGRHLSPTS PTSPKYTPTS PGWSPTSPQT YSPTSPNFAG SPTSPGGPTS PGYSPTSPAF
     SPSYVPSSSA
//

If you have problems or comments...

PBIL Back to PBIL home page