(data stored in SCRATCH3701 zone)

EMBL: BA000037.VV0561

BA000037.VV0561      Location/Qualifiers
FT   CDS_pept        complement(542525..544456)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="VV0561"
FT                   /product="RNA polymerase sigma factor RpoD"
FT                   /db_xref="EnsemblGenomes-Gn:BAC93325"
FT                   /db_xref="EnsemblGenomes-Tr:BAC93325"
FT                   /db_xref="GOA:Q7MP03"
FT                   /db_xref="InterPro:IPR000943"
FT                   /db_xref="InterPro:IPR007127"
FT                   /db_xref="InterPro:IPR007624"
FT                   /db_xref="InterPro:IPR007627"
FT                   /db_xref="InterPro:IPR007630"
FT                   /db_xref="InterPro:IPR007631"
FT                   /db_xref="InterPro:IPR009042"
FT                   /db_xref="InterPro:IPR012760"
FT                   /db_xref="InterPro:IPR013324"
FT                   /db_xref="InterPro:IPR013325"
FT                   /db_xref="InterPro:IPR014284"
FT                   /db_xref="InterPro:IPR028630"
FT                   /db_xref="InterPro:IPR036388"
FT                   /db_xref="InterPro:IPR042189"
FT                   /db_xref="UniProtKB/TrEMBL:Q7MP03"
FT                   /protein_id="BAC93325.1"
FT                   /translation="MVCISHTNSFTRLRSWIPSMDHNPQSQLKLLVIRGKEQGYLTYAE
FT                   VNDHLPAEIVDSEQVEDIIQMINDMGIKVVETAPDADDLALSDETNITDEDAAEAAAAA
FT                   LSSVESEIGRTTDPVRMYMREMGTVELLTREGEIDIAKRIEDGINQVQSSVAEYPGTIP
FT                   YILEQFDKVQAEELRLTDLISGFVDPNADETAAPTATHIGSELAESDLEDEDNTDIDDE
FT                   DEDEDEDGDSSSDSEEDVGIDPEMALEKFTQLRNSYQNLQLAVNEHGRESAQTAQAHEL
FT                   MLDVFKEFRLTPKQFDHLVNELRTAMDRVRTQERLIMKSAVEIAKMPKKSFIALFTGNE
FT                   SNEEWLDQILASDKPYVEKIKLHEEDIRRSIAKLRAIEEETSLSVNNIKDISRRMSIGE
FT                   AKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFS
FT                   TYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPLPEELAERM
FT                   QMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATATSLKAATKD
FT                   VLAGLTPREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSE
FT                   TLRSFLDE"
     gtggtttgca tttcgcatac taattccttc accagattac gaagttggat accgtctatg        60
     gatcataatc cgcagtcaca gctaaaacta cttgtcatcc gtggcaaaga gcaaggctat       120
     ctgacctacg ccgaagtaaa tgaccaccta cctgctgaaa tcgtagattc agaacaggtg       180
     gaagatatca ttcagatgat taacgacatg ggtatcaagg tagtagaaac tgctcctgat       240
     gccgatgacc tagcactgag tgatgaaaca aacattaccg acgaagatgc tgccgaagca       300
     gccgctgctg cgctttcaag cgtagaaagc gaaattggtc gcactacaga cccagtgcgc       360
     atgtacatgc gtgaaatggg taccgttgaa cttctaactc gtgaaggcga aatcgacatc       420
     gctaaacgaa ttgaagatgg tatcaaccaa gtacagtcgt ctgttgctga atacccagga       480
     accattcctt atattcttga acagttcgac aaagtacaag cggaagaact tcgcctcact       540
     gatcttatca gtggttttgt tgatccaaat gcagatgaaa cggcagctcc aaccgcaaca       600
     cacatcggtt cagagcttgc agaatctgat ttggaagatg aagacaacac cgacatcgac       660
     gatgaagacg aagatgaaga cgaagatggc gattcaagca gtgattcaga ggaagatgtc       720
     ggcatcgacc ctgaaatggc gctagagaag ttcactcagc ttcgtaacag ctaccagaat       780
     ctgcaacttg ccgtgaatga acatggtcga gagagtgctc aaacagctca agcccatgaa       840
     ctgatgctcg atgtgtttaa agagtttcgt ctaacaccga agcagtttga ccatttggtt       900
     aacgaacttc gcaccgccat ggatcgcgtt cgtacgcaag agcgcttgat catgaagtct       960
     gcggtagaaa tcgcgaaaat gccgaagaag tcgttcattg cactctttac tggcaacgaa      1020
     tctaacgaag aatggttaga tcagatcctc gcttctgaca agccatacgt agaaaagatc      1080
     aagctgcacg aagaagacat tcgtcgttca atcgccaagc taagagcaat tgaagaagaa      1140
     acgtcgcttt cagtgaacaa catcaaagac atcagccgtc gtatgtctat cggtgaagca      1200
     aaagctcgcc gtgcgaagaa agagatggtt gaggcgaact tacgtctcgt tatctctatc      1260
     gcgaagaagt acacaaaccg tggtctacag ttcttggatc taatccaaga aggtaacatc      1320
     ggtctgatga aagcggttga taaatttgaa taccgtcgtg gttacaagtt ttcgacctac      1380
     gcaacttggt ggattcgtca ggcaatcacg cgttcaatcg cagaccaagc acgtacgatt      1440
     cgtattccgg tacacatgat cgaaacgatc aacaagctaa accgtatctc tcgtcaaatg      1500
     ctacaagaga tgggtcgaga gccgttaccg gaagaactgg cagagcgtat gcaaatgcca      1560
     gaagataaga tccgtaaagt actgaaaatt gctaaagagc caatctcaat ggagacgcca      1620
     atcggtgacg atgaagattc gcatctaggt gatttcatcg aagataccac gctagagcta      1680
     cctcttgatt ctgcaacggc gaccagccta aaagcagcga caaaagatgt tcttgctggc      1740
     ctaacacctc gtgaagcaaa agtactgcgt atgcgttttg gtatcgacat gaacaccgac      1800
     cacactctag aagaagtggg caaacagttc gacgtaacgc gtgagcgtat tcgtcagatc      1860
     gaagcaaaag cactgcgtaa actgcgtcat ccaagccgct cagaaactct gcgcagcttc      1920
     cttgacgagt aa                                                          1932
//

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